ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-10.PDB
Scoring matrix: MYO5_1YP5-10_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.98
Foldx random average score for Saccharomyces cerevisiae: 12.809

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1591284
Proteins after disorder filtering: 4810
 Total fragments: 107655
Proteins after pattern filtering: 2286
 Total fragments: 13534
Proteins after MINT filtering: 45
 Total fragments: 975

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

13.98

3.94

0.00

Best peptides

RKRKGWWR

0.00

-5.66

-9.60

         
Interactors      
P53145

EPLLPPLP

9.11

-2.79

-6.73

LPPLPGQP

9.29

-4.09

-8.03

PPLPGQPP

9.48

-2.86

-6.80

P39113

MSPLGAPP

8.90

-2.94

-6.88

APPPPPHK

9.49

-0.88

-4.82

THPEGPNC

10.41

-1.59

-5.53

P40073

YPQQQPSH

10.84

-0.66

-4.60

PQQQPSHT

11.58

-1.88

-5.82

P25604

PKPKSPHL

7.63

-2.65

-6.59

LPPKPKSP

9.23

-4.45

-8.39

KPPLPPPP

9.49

-4.72

-8.66

P25623

TPPLPPHA

8.91

-3.81

-7.75

TKPLPVEP

10.31

-1.16

-5.10

PKTVPISI

10.53

-3.47

-7.41

Q05933

FRGPAYPS

10.24

-2.03

-5.97

FTLPGTPG

10.31

-0.52

-4.46

PVDPNTDR

10.63

2.39

-1.55

P53094

FPQSPIRA

8.73

-3.13

-7.07

AFPQSPIR

9.33

-1.83

-5.77

YPLKLPPL

9.34

-2.12

-6.06

Q12451

QPHLLPWL

9.22

-3.08

-7.02

LPWLPPTD

9.58

-2.00

-5.94

PHLLPWLP

10.40

-1.40

-5.34

P15891

APPPPPRR

7.82

-2.50

-6.44

QPPLPSRN

8.04

-4.62

-8.56

KPEVPEDE

9.11

-3.81

-7.75

P48562

QFPRGPMH

6.16

-3.88

-7.82

KPPISAPR

7.08

-2.48

-6.42

FPRGPMHP

8.67

-0.92

-4.86

P40341

PPPKPPLN

8.83

-2.22

-6.16

KPPLNDPS

9.75

-0.95

-4.89

RNIPPPPP

10.28

-4.09

-8.03

Q08912

TPSWGPSP

8.99

-2.75

-6.69

DHPKGPPP

9.78

-2.99

-6.93

PPPPDEKD

10.75

-0.13

-4.07

P17555

RPKKPSTL

7.20

-5.08

-9.02

PKKPSTLK

9.29

-1.47

-5.41

KSGPPPRP

10.07

-2.90

-6.84

Q12342

PPPPPPPP

11.77

-3.58

-7.52

APPPPPPP

11.93

-2.45

-6.39

AKAPPPPP

11.96

-1.22

-5.16

P47068

YVPPGIPT

8.44

-2.01

-5.95

MPFVDPSS

8.59

0.01

-3.93

YYVPPGIP

9.15

-1.12

-5.06

P38822

PEVPPPRR

8.90

-2.77

-6.71

APEVPPPR

9.59

-3.35

-7.29

RGPAPEVP

11.95

-2.03

-5.97

P04050

VPPPPVRP

9.21

-3.84

-7.78

PPVRPSIS

9.85

-1.54

-5.48

VSSPGFSP

10.12

-1.37

-5.31

P40450

SPKLFPRL

9.02

-1.41

-5.35

PPLPDLFK

9.57

1.02

-2.92

PPPLPDLF

9.89

-4.84

-8.78

P40453

CPRCGPTA

8.21

-2.29

-6.23

PPDLPIRL

8.26

-4.32

-8.26

VPEPPSWK

8.67

-1.35

-5.29

Q12168

PPPLPPRA

8.67

-4.13

-8.07

PPPVPNRP

9.38

-5.23

-9.17

PNRPGGTT

9.90

-0.48

-4.42

P41832

PPAPPMMP

9.48

-2.90

-6.84

IPPAPPMM

9.75

-3.25

-7.19

PPLPSVLS

9.96

-1.53

-5.47

P36006

PKNPGGLS

8.13

-3.30

-7.24

PPPMGQPK

8.14

-4.15

-8.09

KKPKNPGG

9.11

-1.25

-5.19

P38753

TPVMPPQR

7.44

-3.99

-7.93

PPVPGPAL

8.82

-2.86

-6.80

YPSNLPIQ

9.75

-0.26

-4.20

P38237

IPSKPENT

8.93

-4.03

-7.97

FQIPSKPE

10.19

-0.51

-4.45

PPNVPKKD

10.73

-3.96

-7.90

P34245

GPWPGPAE

8.76

-2.46

-6.40

STPFGPWP

9.34

-1.86

-5.80

PFGPWPGP

12.04

3.30

-0.64

Q01389

RPVPPDSS

9.22

-3.98

-7.92

IPSPSSSP

9.42

-1.50

-5.44

KRSKPLPP

9.52

-1.08

-5.02

Q03306

KPNVPPLQ

8.51

-3.67

-7.61

PPKVPVIN

9.48

-3.27

-7.21

SPPLPQME

9.67

-4.26

-8.20

P34758

LPPPPPPR

9.60

-3.14

-7.08

PPPPPPRA

9.61

-3.93

-7.87

QPLKPTAT

10.32

-3.08

-7.02

P53933

RPPPPPIP

7.55

-4.93

-8.87

YPGNPTSR

8.63

-2.84

-6.78

PPPLPNRQ

9.11

-5.15

-9.09

P32381

LTEPPMNP

11.94

-0.86

-4.80

Q00453

PPPLPIYS

10.12

-3.89

-7.83

APPYFPHP

10.52

0.88

-3.06

APIPLPHQ

10.54

0.94

-3.00

P40021

PPLPPPAR

9.79

-3.20

-7.14

PPLPPPLF

10.23

-2.87

-6.81

LDFLPSTP

10.25

-2.28

-6.22

P36150

IVVNPSSP

12.32

-2.27

-6.21

Q04439

PPPPGMQN

7.58

-3.87

-7.81

IPTPPQNR

8.60

-2.01

-5.95

KPKEPMFE

9.20

-2.63

-6.57

Q12446

PPRRGPAP

7.65

-4.44

-8.38

APPPPPRR

7.82

-2.50

-6.44

VPPPPPMR

7.85

-3.51

-7.45

Q01560

PPPPGEHM

7.47

-3.42

-7.36

YPPPPPGE

9.64

-2.60

-6.54

PPSNAPIY

10.08

-1.20

-5.14

P00950

VPPPPIDA

10.96

-2.44

-6.38

FDVPPPPI

11.25

-2.25

-6.19

SFDVPPPP

12.52

-2.04

-5.98

P53735

VPPPPRTR

9.29

-2.58

-6.52

KLVPPPPR

9.53

-2.13

-6.07

LVPPPPRT

10.52

-3.51

-7.45

P33334

PPPPGLDE

8.25

-3.28

-7.22

PPPPGFEE

8.32

-2.92

-6.86

PPPPGYEI

8.89

-2.88

-6.82

P40523

PPPHGPFS

8.73

-3.31

-7.25

VPPLAPPP

9.55

-3.66

-7.60

PVPVGVPP

10.22

-3.14

-7.08

P40563

MVNPGQLP

8.43

-3.50

-7.44

TPKVPERP

8.62

-3.87

-7.81

RRAPPPVP

8.76

-5.19

-9.13

Q08989

DHPKGPPP

9.78

-2.99

-6.93

PPPPDEKG

10.82

0.32

-3.62

PPPPPPDE

10.89

-1.66

-5.60

P37370

RPHMPSVR

5.40

-6.78

-10.72

PPIPGAVP

7.88

-3.48

-7.42

PPPPGAFS

8.44

-3.11

-7.05

P39743

NPLTSPVA

11.53

-0.53

-4.47

YSNPLTSP

12.44

0.47

-3.47

Q03900

TPSGAPKL

11.27

-2.19

-6.13

PNTPSGAP

12.29

0.03

-3.91

NTPSGAPK

12.69

0.71

-3.23

 


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