ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-29.PDB
Scoring matrix: MYO5_1RUW-29_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 17.69
Foldx random average score for Saccharomyces cerevisiae: 13.368

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1506668
Proteins after disorder filtering: 4113
 Total fragments: 45038
Proteins after pattern filtering: 1917
 Total fragments: 7663
Proteins after MINT filtering: 43
 Total fragments: 346

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

17.69

-1.02

0.00

Best peptides

KYLPRPFRWH

0.00

-5.38

-4.36

         
Interactors      
P53145

PNEPLLPPLP

11.32

-7.41

-6.39

PPLPGQPPLI

13.30

-4.59

-3.57

PLLPPLPGQP

13.33

-6.05

-5.03

P39113

PRRPQKNRYN

8.70

-5.07

-4.05

HRGPRRPQKN

9.63

-4.05

-3.03

SASHRGPRRP

10.32

-2.38

-1.36

P25604

PPKPKSPHLK

9.12

-5.28

-4.26

SPHLKPPLPP

10.49

-5.95

-4.93

PKSPHLKPPL

11.74

-5.21

-4.19

P25623

SNLPKTVPIS

8.21

-4.06

-3.04

KTKPLPVEPA

10.40

-5.34

-4.32

LPKTVPISIS

12.53

-4.64

-3.62

Q05933

TKFRGPAYPS

10.35

-5.83

-4.81

P53094

YPLKLPPLPL

9.45

-6.59

-5.57

PVSPKPVSKS

10.07

-5.35

-4.33

DEDPVSPKPV

10.64

-3.80

-2.78

Q12451

HLLPWLPPTD

10.26

-4.11

-3.09

QPHLLPWLPP

11.80

-5.85

-4.83

PKHAPPPVPN

12.10

-4.53

-3.51

P15891

IISPKPFSKP

9.55

-5.89

-4.87

PRRATPEKKP

10.53

-5.97

-4.95

AEAPKPEVPE

10.59

-5.40

-4.38

P48562

PYRPHHNMIN

8.81

-4.17

-3.15

GQFPRGPMHP

8.89

-6.09

-5.07

RTAPKPPISA

9.36

-5.14

-4.12

P40341

SRNIPPPPPP

12.96

-4.91

-3.89

NSRNIPPPPP

13.02

-5.42

-4.40

Q08912

GDHPKGPPPP

12.33

-2.05

-1.03

P17555

SKSGPPPRPK

9.42

-5.08

-4.06

PKKPSTLKTK

10.71

-3.16

-2.14

PPRPKKPSTL

11.66

-2.17

-1.15

Q12342

AKAPPPPPPP

12.90

-6.33

-5.31

RKAKAPPPPP

13.01

-5.62

-4.60

P47068

DPSSNPFFRK

9.24

-5.33

-4.31

KYYVPPGIPT

10.86

-4.22

-3.20

PISPETKKET

11.13

-3.23

-2.21

P38822

APEVPPPRRS

10.54

-4.70

-3.68

P04050

PVRPSISFNE

9.97

-5.12

-4.10

TCLPVPPPPV

10.21

-6.79

-5.77

SYSPTSPSYS

12.18

-1.64

-0.62

P40450

SPKLFPRLSS

11.13

-4.72

-3.70

SSSPKLFPRL

11.25

-3.89

-2.87

PPLPDLFKTK

11.28

-5.07

-4.05

P40453

PDLPIRLRKR

7.69

-6.08

-5.06

RLRKRPPPPP

8.17

-7.28

-6.26

IRLRKRPPPP

9.39

-6.39

-5.37

Q12168

VDNDDPYFPQ

11.42

-5.28

-4.26

NDDPYFPQFR

11.46

-1.37

-0.35

KVQHPVPKPN

11.69

-5.27

-4.25

P41832

VLSSQPPPPP

13.12

-5.32

-4.30

TDGVIPPAPP

13.35

-5.26

-4.24

P36006

MGQPKDPKFE

10.26

-2.04

-1.02

PKDPKFEAAY

10.31

-2.63

-1.61

SKSNKKPKNP

10.71

-4.23

-3.21

P38753

EYSPYPSNLP

10.59

-4.59

-3.57

SNLPIQHPTN

11.64

-3.15

-2.13

NNTPVMPPQR

12.61

-5.11

-4.09

P38237

ENFQIPSKPE

8.71

-5.90

-4.88

LNDPFVPPPN

11.70

-4.34

-3.32

DPDLNDPFVP

13.36

-3.54

-2.52

P34245

AYSTPFGPWP

12.15

-3.32

-2.30

YSTPFGPWPG

12.88

-2.28

-1.26

Q01389

RRYPQTPSYY

10.24

-2.95

-1.93

RSKPLPPQLL

10.77

-5.85

-4.83

REAPKPPANT

11.09

-5.12

-4.10

Q03306

VGEEKPFRIP

8.84

-4.65

-3.63

YRQPTPSPPL

11.51

-4.89

-3.87

GRLPNSAPST

11.60

-3.96

-2.94

P34758

DIHSQPNKPN

9.04

-4.76

-3.74

QQLPLEPLKP

10.76

-6.09

-5.07

QHLPPPPPPR

12.19

-6.43

-5.41

P53933

RTRRRPPPPP

9.00

-5.51

-4.49

GYNDLPMELP

10.64

-2.95

-1.93

RRRPPPPPIP

11.06

-6.25

-5.23

P32381

ILLTEPPMNP

10.92

-6.67

-5.65

Q00453

SLYAPPYFPH

9.24

-5.93

-4.91

PYFPHPMPSA

10.29

-2.61

-1.59

FPHPMPSAPI

11.15

-3.32

-2.30

P40021

PPLPPPLFPS

9.77

-6.46

-5.44

PPLPPPARSQ

10.09

-4.09

-3.07

SLDFLPSTPS

10.33

-5.62

-4.60

P36150

PIVVNPSSPS

13.01

-5.43

-4.41

Q04439

SSKPKEPMFE

9.73

-4.74

-3.72

SRHSKKPAPP

10.88

-3.59

-2.57

PPSSKPKEPM

11.27

-3.89

-2.87

Q12446

PKHSLPPLPN

8.93

-6.11

-5.09

FPFPIPEIPS

9.66

-5.64

-4.62

QNRPLPQLPN

9.75

-6.03

-5.01

Q01560

PYYPPPPPGE

12.24

-3.22

-2.20

PPEPQPYYPP

12.36

-6.53

-5.51

EPQPYYPPPP

12.88

-3.93

-2.91

P00950

RSFDVPPPPI

12.32

-6.03

-5.01

P53735

KLVPPPPRTR

10.56

-5.70

-4.68

PKLVPPPPRT

10.77

-6.11

-5.09

APKLVPPPPR

11.62

-6.08

-5.06

P33334

SDLALPPPPP

10.50

-5.86

-4.84

SKMPTRFPPA

11.64

-5.52

-4.50

PGGPKFEPLY

11.77

-3.16

-2.14

P40523

HNSPRNPDTG

11.97

-2.26

-1.24

PPGTVPNMQM

12.50

-5.17

-4.15

HVSSVTPQPP

12.55

-4.07

-3.05

P40563

KRRAPPPVPK

10.99

-5.44

-4.42

RRAPPPVPKK

11.74

-5.73

-4.71

EVTPKVPERP

12.09

-2.92

-1.90

Q08989

GDHPKGPPPP

12.33

-2.05

-1.03

P37370

SQMPKPRPFQ

8.29

-6.29

-5.27

VPQNRPHMPS

8.50

-5.73

-4.71

MPKPRPFQNK

9.69

-2.98

-1.96

Q03900

SHLPNTPSGA

13.22

-0.71

0.31

 


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