ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-27.PDB
Scoring matrix: MYO5_1RUW-27_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 11.71
Foldx random average score for Saccharomyces cerevisiae: 13.233

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1955224
Proteins after disorder filtering: 4738
 Total fragments: 141254
Proteins after pattern filtering: 2281
 Total fragments: 16567
Proteins after MINT filtering: 45
 Total fragments: 1041

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAAA

11.71

-3.05

0.00
Best peptides

RGTYWDPWR

0.00

-0.75

2.30
         
Interactors      
P53145

LPPLPGQPP

9.29

-5.70

-2.65

LPGQPPLIN

9.66

-6.78

-3.73

PLPGQPPLI

11.15

-3.00

0.05
P39113

RGPRRPQKN

6.19

-5.10

-2.05

LFTHPEGPN

6.91

-6.30

-3.25

PLGAPPPPP

8.50

-5.13

-2.08
P40073

FDGYPQQQP

8.00

-4.73

-1.68

YPQQQPSHT

8.65

-1.55

1.50

GYPQQQPSH

10.81

-2.22

0.83
P25604

LPPKPKSPH

6.78

-5.77

-2.72

KSPHLKPPL

6.80

-5.89

-2.84

KPPLPPPPP

6.85

-6.74

-3.69
P25623

LPVEPASPS

6.54

-2.62

0.43

FTPSEVPPS

8.10

-6.59

-3.54

LPPHATPKN

8.14

-4.63

-1.58
Q05933

RGPAYPSNS

8.25

-3.95

-0.90

LPGTPGFPL

8.75

-5.15

-2.10

TKFRGPAYP

9.07

-1.70

1.35
P53094

REPNEPPPP

6.33

-4.00

-0.95

EPNEPPPPC

6.63

-5.09

-2.04

QTREPNEPP

7.43

-3.89

-0.84
Q12451

AAPKHAPPP

8.00

-5.28

-2.23

APKHAPPPV

8.81

-6.76

-3.71

PKHAPPPVP

9.59

-6.43

-3.38
P15891

RSSAAPPPP

6.45

-4.40

-1.35

SSAAPPPPP

6.98

-4.53

-1.48

RRATPEKKP

7.71

-4.52

-1.47
P48562

LNPYRPHHN

5.13

-3.55

-0.50

IGPAPRPPS

6.44

-7.39

-4.34

QRTAPKPPI

6.52

-5.06

-2.01
P40341

RNIPPPPPP

8.81

-5.50

-2.45

KPPLNDPSN

9.04

-2.95

0.10

NSRNIPPPP

9.61

-6.65

-3.60
Q08912

HPKGPPPPP

7.92

-5.92

-2.87

HGDHPKGPP

8.23

-5.27

-2.22

YTPSWGPSP

8.63

-3.98

-0.93
P17555

SKSGPPPRP

7.14

-4.21

-1.16

AAPAPPPPP

7.61

-5.12

-2.07

PPPRPKKPS

8.55

-5.85

-2.80
Q12342

RKAKAPPPP

5.87

-3.97

-0.92

KAKAPPPPP

6.19

-5.46

-2.41

KAPPPPPPP

10.21

-5.87

-2.82
P47068

TAPSPPPHQ

7.13

-4.34

-1.29

TPPAPPAPP

7.20

-6.45

-3.40

SHTAPSPPP

7.56

-4.26

-1.21
P38822

RGPAPEVPP

6.67

-3.68

-0.63

PAPEVPPPR

8.09

-1.59

1.46

APEVPPPRR

10.85

-5.73

-2.68
P04050

YGEAPTSPG

8.21

-6.09

-3.04

GSPAYSPKQ

9.10

-4.46

-1.41

TSPAYSPTS

9.54

-4.07

-1.02
P40450

KLPQLPPPP

6.51

-6.73

-3.68

SSPKLFPRL

6.54

-4.13

-1.08

LPQLPPPPP

7.45

-4.18

-1.13
P40453

LRKRPPPPP

4.81

-8.03

-4.98

RLRKRPPPP

4.87

-7.11

-4.06

KVPEPPSWK

5.09

-3.95

-0.90
Q12168

KVQHPVPKP

7.30

-4.35

-1.30

DDPYFPQFR

7.78

-3.27

-0.22

TNRGPPPLP

8.49

-4.90

-1.85
P41832

LSSQPPPPP

5.48

-8.21

-5.16

KGETPPPPP

5.95

-6.45

-3.40

TGDSPAPPP

7.10

-3.92

-0.87
P36006

SNKKPKNPG

8.27

-3.24

-0.19

KKPKNPGGL

9.04

-3.03

0.02

KSNKKPKNP

9.31

-4.06

-1.01
P38753

YSPYPSNLP

7.36

-4.38

-1.33

TPVMPPQRQ

8.64

-5.53

-2.48

PYPSNLPIQ

9.81

-3.14

-0.09
P38237

IPSKPENTV

10.48

-4.00

-0.95

QIPSKPENT

10.57

-4.44

-1.39

ENFQIPSKP

10.85

-1.78

1.27
P34245

TPFGPWPGP

9.61

-3.62

-0.57

YSTPFGPWP

9.70

-4.03

-0.98

AYSTPFGPW

10.42

-2.13

0.92
Q01389

KRSKPLPPQ

5.47

-4.55

-1.50

KREAPKPPA

6.06

-8.22

-5.17

TPSRPVPPD

6.50

-2.79

0.26
Q03306

RQPTPSPPL

6.74

-5.55

-2.50

ASSEPSSPP

8.07

-4.95

-1.90

PRTKPNVPP

8.86

-3.14

-0.09
P34758

LPLEPLKPT

6.25

-4.12

-1.07

TGLQPLKPT

7.51

-5.33

-2.28

QPQHLPPPP

8.08

-6.29

-3.24
P53933

RTRRRPPPP

4.77

-4.04

-0.99

TRRRPPPPP

5.52

-4.43

-1.38

KRVAPPPLP

6.76

-6.61

-3.56
P32381

LLTEPPMNP

7.30

-3.49

-0.44

LTEPPMNPL

13.06

-3.46

-0.41
Q00453

LPHQPPPLP

6.31

-5.30

-2.25

APPYFPHPM

6.71

-4.80

-1.75

MPSAPIPLP

7.32

-6.20

-3.15
P40021

KNTGPPPPL

5.74

-4.21

-1.16

SESHPPNHP

9.05

-3.33

-0.28

LPSTPSQMN

9.15

-4.36

-1.31
P36150

IVVNPSSPS

9.04

-4.53

-1.48
Q04439

KKPAPPPPG

5.73

-5.92

-2.87

SNARPSPPT

6.25

-4.30

-1.25

KPKEPMFEA

6.69

-4.18

-1.13
Q12446

RGPAPPPPP

4.14

-5.83

-2.78

RNNRPVPPP

4.36

-7.30

-4.25

RLPAPPPPP

4.82

-5.41

-2.36
Q01560

QPYYPPPPP

5.11

-4.02

-0.97

QPPEPQPYY

6.81

-5.14

-2.09

APQEPPAPQ

7.19

-5.20

-2.15
P00950

RSFDVPPPP

7.41

-3.44

-0.39

FDVPPPPID

10.72

-7.05

-4.00

SFDVPPPPI

11.74

-5.57

-2.52
P53735

PAPKLVPPP

8.97

-3.31

-0.26

KLVPPPPRT

9.72

-6.03

-2.98

APKLVPPPP

10.71

-5.17

-2.12
P33334

MPTRFPPAV

5.72

-6.27

-3.22

KMPTRFPPA

7.06

-3.59

-0.54

MSGLPPPPP

7.33

-7.08

-4.03
P40523

PPLAPPPHG

7.84

-5.52

-2.47

SSVTPQPPS

8.12

-3.81

-0.76

VPPLAPPPH

9.82

-2.10

0.95
P40563

KRRAPPPVP

7.45

-7.46

-4.41

PSERPKRRA

7.95

-4.99

-1.94

VTPKVPERP

8.44

-3.89

-0.84
Q08989

HPKGPPPPP

7.92

-5.92

-2.87

NGDHPKGPP

8.75

-5.01

-1.96

KGPPPPPPP

9.54

-5.50

-2.45
P37370

KVPQNRPHM

6.39

-4.29

-1.24

KNPTKSPPP

6.52

-5.40

-2.35

IPLAPLPPP

6.52

-5.10

-2.05
P39743

SNPLTSPVA

12.41

-2.02

1.03
Q03900

LPNTPSGAP

9.91

-2.90

0.15

NTPSGAPKL

11.11

-3.63

-0.58

TPSGAPKLK

12.01

-1.84

1.21

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                      DISCLAIMER