ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-18.PDB
Scoring matrix: MYO5_1RUW-18_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 19.18
Foldx random average score for Saccharomyces cerevisiae: 17.898

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1676952
Proteins after disorder filtering: 4539
 Total fragments: 86069
Proteins after pattern filtering: 2168
 Total fragments: 11367
Proteins after MINT filtering: 45
 Total fragments: 539

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

19.18

-0.29

0.00

Best peptides

YMPLHGIRWR

0.00

-5.28

-4.99

         
Interactors      
P53145

NEPLLPPLPG

12.59

-3.24

-2.95

LPPLPGQPPL

16.57

-4.83

-4.54

LLPPLPGQPP

16.98

-1.51

-1.22

P39113

RGPRRPQKNR

12.20

-3.32

-3.03

ASHRGPRRPQ

14.00

-1.14

-0.85

PRRPQKNRYN

14.11

-2.50

-2.21

P40073

FDGYPQQQPS

15.10

-1.51

-1.22

GYPQQQPSHT

15.55

-2.94

-2.65

P25604

PKPKSPHLKP

14.76

1.38

1.67

EQNTPPLPPK

15.18

-2.12

-1.83

QAPSLPPKPN

15.39

-0.83

-0.54

P25623

SSNLPKTVPI

13.53

-2.42

-2.13

PLPPHATPKN

15.99

-1.43

-1.14

SISQPPLQPQ

16.32

-2.42

-2.13

Q05933

NFTLPGTPGF

12.94

-3.02

-2.73

TKFRGPAYPS

15.32

-2.20

-1.91

TFPVDPNTDR

15.37

-2.27

-1.98

P53094

AFPQSPIRAY

12.04

-1.12

-0.83

NVPLPPQTRE

14.53

-3.16

-2.87

REPNEPPPPC

14.61

-3.72

-3.43

Q12451

PHLLPWLPPT

14.48

-3.13

-2.84

AAPKHAPPPV

14.67

-1.82

-1.53

PKHAPPPVPN

16.61

-1.69

-1.40

P15891

RRATPEKKPK

11.39

-2.61

-2.32

KEPVKTPSPA

14.97

-2.09

-1.80

AAPPPPPRRA

14.99

-1.52

-1.23

P48562

PSPLNPYRPH

12.68

-2.81

-2.52

TMRQAPKRPD

13.76

-1.41

-1.12

QFPRGPMHPN

14.82

-2.63

-2.34

P40341

SRNIPPPPPP

15.87

-3.23

-2.94

RNIPPPPPPP

17.02

-1.24

-0.95

Q08912

YTPSWGPSPM

13.55

-2.87

-2.58

VCYTPSWGPS

15.96

-1.44

-1.15

THGDHPKGPP

17.18

0.44

0.73

P17555

SKSGPPPRPK

14.42

-1.24

-0.95

RPKKPSTLKT

15.54

-1.94

-1.65

ASATAAPAPP

17.46

-0.07

0.22

Q12342

RKAKAPPPPP

13.99

-3.47

-3.18

P47068

YHPMPNTAPP

11.95

-4.14

-3.85

VDPSSNPFFR

13.01

-1.69

-1.40

SRTLPPHVPS

13.32

-3.80

-3.51

P38822

VGDTPTTTPG

16.22

-1.63

-1.34

RGPAPEVPPP

16.56

-1.31

-1.02

PAPEVPPPRR

16.76

-1.84

-1.55

P04050

PVPPPPVRPS

15.08

-2.14

-1.85

YSPTSPNYSP

15.85

-0.20

0.09

NYSPTSPSYS

16.10

-2.18

-1.89

P40450

VSSSPKLFPR

13.59

-0.28

0.01

KLPQLPPPPP

15.87

-3.51

-3.22

VSCIAAPAPP

16.12

-1.78

-1.49

P40453

PDLPIRLRKR

13.74

-1.65

-1.36

RLRKRPPPPP

13.96

-4.14

-3.85

WKPPDLPIRL

14.06

-1.82

-1.53

Q12168

NDDPYFPQFR

13.74

-1.83

-1.54

NKVQHPVPKP

14.35

4.19

4.48

NRGPPPLPPR

14.54

-1.87

-1.58

P41832

KGETPPPPPL

16.09

-3.03

-2.74

DGVIPPAPPM

16.47

-2.83

-2.54

LSSQPPPPPP

16.83

-3.18

-2.89

P36006

MGQPKDPKFE

14.43

-3.11

-2.82

KSNKKPKNPG

15.30

-2.64

-2.35

NIPIPPPPPP

15.36

-4.28

-3.99

P38753

YSPYPSNLPI

12.23

-1.53

-1.24

NLPIQHPTNS

13.82

-3.73

-3.44

HANNTPVMPP

16.21

0.34

0.63

P38237

NFQIPSKPEN

15.51

-2.93

-2.64

PFVPPPNVPK

15.96

-1.73

-1.44

ENFQIPSKPE

16.24

-1.10

-0.81

P34245

YSTPFGPWPG

14.07

-1.77

-1.48

AYSTPFGPWP

15.41

-2.53

-2.24

FGPWPGPAEC

15.86

-2.25

-1.96

Q01389

RYPQTPSYYY

12.55

-3.52

-3.23

ASPSYPSIFR

14.30

-1.47

-1.18

RRYPQTPSYY

14.54

-2.33

-2.04

Q03306

NKSIPRTKPN

10.23

-2.94

-2.65

PFRIPSSTKD

14.22

-3.89

-3.60

NGRLPNSAPS

14.29

-2.90

-2.61

P34758

QLPLEPLKPT

11.75

-3.63

-3.34

NQQQPQHLPP

14.13

-0.62

-0.33

SGGLQPLKPT

14.20

-2.31

-2.02

P53933

YNDLPMELPH

12.11

-4.96

-4.67

RRPPPPPIPS

14.16

-2.29

-2.00

TRRRPPPPPI

15.35

-2.65

-2.36

P32381

LLTEPPMNPL

15.46

-3.10

-2.81

ILLTEPPMNP

16.59

-1.53

-1.24

Q00453

YAPPYFPHPM

13.83

-2.14

-1.85

YFPHPMPSAP

15.04

-2.57

-2.28

HQPPPLPIYS

15.26

-2.37

-2.08

P40021

NYVISPNLPT

12.86

-2.34

-2.05

FLPSTPSQMN

14.29

-3.35

-3.06

KSESHPPNHP

15.15

-1.86

-1.57

P36150

PIVVNPSSPS

17.48

-3.23

-2.94

Q04439

PSSKPKEPMF

15.29

-3.19

-2.90

RHSKKPAPPP

15.40

-1.34

-1.05

RQANIPPPPP

15.63

-2.19

-1.90

Q12446

NRPLPQLPNR

11.88

-3.92

-3.63

RLPAPPPPPR

12.83

-3.00

-2.71

SAPIPPTLPS

13.39

-2.89

-2.60

Q01560

YYPPPPPGEH

15.48

-2.63

-2.34

HHQPPEPQPY

16.50

-1.49

-1.20

SAPQEPPAPQ

16.98

-0.87

-0.58

P00950

RRSFDVPPPP

16.17

-2.07

-1.78

RSFDVPPPPI

16.33

-2.45

-2.16

P53735

KLVPPPPRTR

14.51

-0.24

0.05

PKLVPPPPRT

16.06

-3.01

-2.72

LVPPPPRTRS

16.97

-2.88

-2.59

P33334

NNAIPGGPKF

13.19

-0.80

-0.51

NAIPGGPKFE

13.53

-1.53

-1.24

LFFDPSLNPI

13.64

-2.47

-2.18

P40523

YMHNSPRNPD

13.32

-2.78

-2.49

GGPLASPTHY

14.36

-4.19

-3.90

LGAPPGTVPN

14.90

-1.86

-1.57

P40563

RRAPPPVPKK

14.69

-2.40

-2.11

PSERPKRRAP

15.08

-1.48

-1.19

SEVTPKVPER

15.16

-1.14

-0.85

Q08989

DHPKGPPPPP

17.47

-1.64

-1.35

TNGDHPKGPP

17.47

-1.42

-1.13

P37370

VSQMPKPRPF

11.93

-3.17

-2.88

RPHMPSVRPA

13.23

-3.99

-3.70

QMPKPRPFQN

14.21

-2.47

-2.18

P39743

AYSNPLTSPV

14.88

-1.45

-1.16

Q03900

PSGAPKLKNY

16.81

-0.91

-0.62

GSHLPNTPSG

17.29

-1.64

-1.35

HLPNTPSGAP

17.73

-2.63

-2.34

 


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