ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-13.PDB
Scoring matrix: MYO5_1RUW-13_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.94
Foldx random average score for Saccharomyces cerevisiae: 12.567

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1494806
Proteins after disorder filtering: 4609
 Total fragments: 64602
Proteins after pattern filtering: 1906
 Total fragments: 6515
Proteins after MINT filtering: 42
 Total fragments: 333

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.94

-1.73

0.00

Best peptides

HKPFFPRH

0.00

-3.53

-1.80

         
Interactors      
P53145

NEPLLPPL

10.62

-5.74

-4.01

LLPPLPGQ

11.56

-5.70

-3.97

PGQPPLIN

12.42

-4.65

-2.92

P39113

RGPRRPQK

9.92

-6.04

-4.31

SHRGPRRP

10.49

-3.36

-1.63

LFTHPEGP

10.82

-4.99

-3.26

P40073

PQQQPSHT

11.14

-6.14

-4.41

P25604

LKPPLPPP

9.43

-5.75

-4.02

EQNTPPLP

10.37

-4.76

-3.03

PHLKPPLP

10.99

-5.27

-3.54

P25623

PKTVPISI

11.03

-4.44

-2.71

TKPLPVEP

11.31

-6.06

-4.33

ASDTPPLP

11.42

-4.30

-2.57

Q05933

KFRGPAYP

9.86

-5.90

-4.17

HSTFPVDP

10.58

-4.29

-2.56

GTPGFPLN

11.41

-4.30

-2.57

P53094

KLPPLPLT

9.25

-6.85

-5.12

LKLPPLPL

9.26

-5.45

-3.72

LNVPLPPQ

10.71

-5.25

-3.52

Q12451

HAPPPVPN

9.84

-5.02

-3.29

LLPWLPPT

10.57

-6.43

-4.70

PHLLPWLP

11.20

-4.74

-3.01

P15891

PEGEPDVK

10.58

-3.68

-1.95

KEPVKTPS

10.88

-3.78

-2.05

EAAQPPLP

11.13

-5.38

-3.65

P48562

MRQAPKRP

7.56

-6.69

-4.96

LNPYRPHH

7.93

-5.73

-4.00

QFPRGPMH

9.04

-6.06

-4.33

P40341

NDPSNPVS

10.24

-2.54

-0.81

RNIPPPPP

11.60

-5.94

-4.21

SRNIPPPP

11.95

-5.94

-4.21

Q08912

PKGPPPPP

11.75

-5.57

-3.84

YTPSWGPS

11.99

-2.78

-1.05

HGDHPKGP

12.13

-3.38

-1.65

P17555

KSGPPPRP

9.00

-6.00

-4.27

PKKPSTLK

11.11

-2.99

-1.26

PRPKKPST

12.03

-3.70

-1.97

Q12342

AKAPPPPP

11.43

-5.36

-3.63

KAPPPPPP

11.76

-6.06

-4.33

KAKAPPPP

12.11

-6.00

-4.27

P47068

TAPPLPRA

9.38

-5.66

-3.93

YYVPPGIP

10.05

-6.43

-4.70

EDKVPPHP

10.11

-4.63

-2.90

P38822

PEVPPPRR

7.63

-5.95

-4.22

RGPAPEVP

12.42

-4.83

-3.10

P04050

YSPTSPNY

11.32

-3.25

-1.52

YSPTSPAY

11.52

-3.57

-1.84

YSPTSPSY

11.72

-2.88

-1.15

P40450

PKLFPRLS

6.43

-6.41

-4.68

KLPQLPPP

12.33

-6.29

-4.56

SSPKLFPR

12.48

-3.56

-1.83

P40453

RKRPPPPP

9.22

-6.90

-5.17

LRKRPPPP

9.48

-6.87

-5.14

PEIPPPLP

10.99

-4.72

-2.99

Q12168

DDPYFPQF

8.87

-4.27

-2.54

PYFPQFRS

9.08

-3.51

-1.78

NRGPPPLP

10.25

-5.21

-3.48

P41832

LSSQPPPP

11.92

-5.61

-3.88

KGETPPPP

11.96

-5.76

-4.03

P36006

KKPKNPGG

11.11

-5.09

-3.36

NKKPKNPG

11.47

-2.40

-0.67

GQPKDPKF

11.49

-4.65

-2.92

P38753

ANNTPVMP

11.02

-5.28

-3.55

PSNLPIQH

11.64

-5.55

-3.82

NLPIQHPT

11.93

-3.80

-2.07

P38237

NFQIPSKP

9.14

-5.78

-4.05

TFPEPEVP

10.54

-5.24

-3.51

NDPFVPPP

10.90

-4.53

-2.80

P34245

YSTPFGPW

11.92

-3.34

-1.61

STPFGPWP

12.34

-5.61

-3.88

Q01389

SKPLPPQL

9.17

-6.84

-5.11

RYPQTPSY

10.77

-3.18

-1.45

RSKPLPPQ

11.15

-4.98

-3.25

Q03306

EKPFRIPS

8.52

-3.21

-1.48

PFRIPSST

10.49

-4.89

-3.16

RQPTPSPP

10.73

-4.52

-2.79

P34758

IHSQPNKP

10.55

-4.27

-2.54

LEPLKPTA

10.57

-5.26

-3.53

LQPLKPTA

10.84

-5.05

-3.32

P53933

RRPPPPPI

10.05

-6.80

-5.07

NDLPMELP

10.46

-3.65

-1.92

RRRPPPPP

10.84

-6.81

-5.08

Q00453

LYAPPYFP

8.33

-6.06

-4.33

YFPHPMPS

8.55

-5.39

-3.66

YAPPYFPH

9.73

-5.07

-3.34

P40021

PLPPPARS

9.54

-6.00

-4.27

LDFLPSTP

10.40

-5.60

-3.87

PLPPPLFP

11.51

-6.13

-4.40

Q04439

SKPKEPMF

8.34

-6.54

-4.81

KKPAPPPP

9.87

-6.35

-4.62

NIPTPPQN

11.35

-6.22

-4.49

Q12446

HKAPPPPP

8.79

-6.97

-5.24

PFPFPVPQ

9.10

-6.41

-4.68

KHSLPPLP

9.37

-6.51

-4.78

Q01560

YYPPPPPG

10.18

-7.18

-5.45

HHQPPEPQ

10.46

-4.04

-2.31

PEPQPYYP

10.53

-5.14

-3.41

P00950

FDVPPPPI

10.04

-5.32

-3.59

SFDVPPPP

12.03

-6.39

-4.66

P53735

LVPPPPRT

9.38

-7.73

-6.00

PKLVPPPP

11.01

-6.31

-4.58

KLVPPPPR

11.14

-6.76

-5.03

P33334

LDNPMVPS

10.41

-2.98

-1.25

FDPSLNPI

10.43

-2.64

-0.91

SKMPTRFP

11.04

-3.82

-2.09

P40523

MHNSPRNP

10.97

-5.18

-3.45

PGTVPNMQ

11.43

-6.10

-4.37

PLASPTHY

11.52

-4.52

-2.79

P40563

PSERPKRR

7.87

-5.65

-3.92

RRAPPPVP

10.45

-6.81

-5.08

RAPPPVPK

10.73

-4.79

-3.06

Q08989

PKGPPPPP

11.75

-5.57

-3.84

P37370

PKPRPFQN

8.14

-6.08

-4.35

HAPPLPPT

9.56

-6.72

-4.99

PKVPQNRP

9.63

-4.20

-2.47

Q03900

PSGAPKLK

12.17

-3.74

-2.01

 


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