ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-12.PDB
Scoring matrix: MYO5_1RUW-12_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.6
Foldx random average score for Saccharomyces cerevisiae: 13.032

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7178
 Total fragments: 1198633
Proteins after disorder filtering: 4453
 Total fragments: 57857
Proteins after pattern filtering: 2102
 Total fragments: 11089
Proteins after MINT filtering: 45
 Total fragments: 879

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

14.60

-0.58

0.00

Best peptides

RKIPPRWR

0.00

-3.90

-3.32

         
Interactors      
P53145

PLLPPLPG

11.14

-4.54

-3.96

LLPPLPGQ

11.77

-2.78

-2.20

PGQPPLIN

11.82

-3.06

-2.48

P39113

SHRGPRRP

6.62

-2.36

-1.78

HRGPRRPQ

8.86

-1.59

-1.01

PRRPQKNR

10.87

-2.83

-2.25

P40073

DGYPQQQP

12.54

-2.54

-1.96

P25604

HLKPPLPP

10.15

-3.36

-2.78

LKPPLPPP

10.61

-3.24

-2.66

PSLPPKPN

10.93

-4.49

-3.91

P25623

SQPPLQPQ

11.59

-2.61

-2.03

DTPPLPPH

11.64

-2.85

-2.27

SEVPPSTP

12.18

-2.43

-1.85

Q05933

PGTPGFPL

11.21

-3.49

-2.91

FRGPAYPS

11.48

-1.69

-1.11

RGPAYPSN

11.89

-1.62

-1.04

P53094

PQSPIRAY

9.15

-1.48

-0.90

LKLPPLPL

9.96

-4.42

-3.84

KLPPLPLT

11.00

-2.66

-2.08

Q12451

PHLLPWLP

11.00

-3.63

-3.05

HLLPWLPP

11.61

-3.90

-3.32

PKHAPPPV

11.93

-2.46

-1.88

P15891

PPPPPRRA

6.58

-4.05

-3.47

PPPPRRAT

7.42

-3.27

-2.69

PPLPSRNV

8.45

-2.24

-1.66

P48562

IGPAPRPP

6.95

-2.44

-1.86

RQAPKRPD

7.14

-1.59

-1.01

PLNPYRPH

8.74

-2.44

-1.86

P40341

RNIPPPPP

9.07

-3.99

-3.41

NIPPPPPP

11.02

-3.37

-2.79

PPPPPKPP

11.25

-4.21

-3.63

Q08912

KGPPPPPP

10.79

-3.13

-2.55

CYTPSWGP

11.18

-3.02

-2.44

GPPPPPPP

12.11

-3.20

-2.62

P17555

SGPPPRPK

6.13

-3.73

-3.15

PPPRPKKP

10.89

-3.61

-3.03

PKKPSTLK

11.06

-1.84

-1.26

Q12342

KAPPPPPP

10.78

-3.18

-2.60

KAKAPPPP

11.49

-2.73

-2.15

AKAPPPPP

11.52

-2.28

-1.70

P47068

APPLPRAP

8.36

-2.90

-2.32

PSSNPFFR

9.85

-3.54

-2.96

DKVPPHPV

10.15

-3.56

-2.98

P38822

PEVPPPRR

10.33

-3.78

-3.20

RGPAPEVP

11.96

-1.32

-0.74

P04050

PPPPVRPS

8.01

-2.84

-2.26

PVPPPPVR

10.81

-2.82

-2.24

PVRPSISF

10.99

-2.32

-1.74

P40450

PKLFPRLS

7.01

-2.12

-1.54

SSPKLFPR

10.11

-3.75

-3.17

PPLPDLFK

10.21

-4.18

-3.60

P40453

PDLPIRLR

7.38

-2.43

-1.85

PEPPSWKP

8.71

-4.79

-4.21

RKRPPPPP

9.00

-3.64

-3.06

Q12168

PPLPPRAN

7.70

-2.01

-1.43

PPVPNRPG

7.83

-3.52

-2.94

PYFPQFRS

8.45

-4.91

-4.33

P41832

PAPPMMPA

9.93

-4.37

-3.79

PPPPPMAL

9.97

-4.64

-4.06

PPAPPMMP

10.58

-4.54

-3.96

P36006

PPPPPMGQ

10.21

-4.54

-3.96

PKDPKFEA

10.56

-3.05

-2.47

ANIPIPPP

10.70

-2.96

-2.38

P38753

PVMPPQRQ

9.69

-4.12

-3.54

AHISPPVP

11.33

-2.65

-2.07

ISPPVPGP

11.93

-2.37

-1.79

P38237

FQIPSKPE

9.04

-3.92

-3.34

PFVPPPNV

11.40

-3.48

-2.90

FVPPPNVP

11.49

-2.49

-1.91

P34245

STPFGPWP

10.18

-3.20

-2.62

TPFGPWPG

10.77

-2.54

-1.96

AYSTPFGP

12.92

-1.51

-0.93

Q01389

PSTPSRPV

8.33

-2.61

-2.03

PSYPSIFR

9.38

-2.20

-1.62

SSPPPIPK

10.46

-3.27

-2.69

Q03306

EEKPFRIP

6.65

-2.92

-2.34

KSIPRTKP

10.09

-2.36

-1.78

PNVPPLQT

11.09

-4.20

-3.62

P34758

PPPPPRAQ

7.04

-3.42

-2.84

PNKPNYGM

10.07

-3.15

-2.57

PTQPSYTN

10.94

-2.29

-1.71

P53933

PPLPNRQL

9.08

-3.77

-3.19

RRRPPPPP

10.02

-2.95

-2.37

RRPPPPPI

10.28

-4.04

-3.46

P32381

LTEPPMNP

11.33

-2.76

-2.18

TEPPMNPL

12.63

-2.71

-2.13

Q00453

YAPPYFPH

8.44

-4.49

-3.91

LYAPPYFP

8.71

-3.60

-3.02

YFPHPMPS

9.96

-3.55

-2.97

P40021

PLPPPLFP

8.73

-4.16

-3.58

LPPPLFPS

9.94

-4.36

-3.78

YVISPNLP

10.81

-2.37

-1.79

P36150

IVVNPSSP

12.96

-2.06

-1.48

Q04439

KPKEPMFE

9.79

-4.02

-3.44

ANIPPPPP

10.08

-4.02

-3.44

KKPAPPPP

10.27

-2.97

-2.39

Q12446

PPPPPRRG

6.66

-4.05

-3.47

PPPPHRHV

6.95

-3.48

-2.90

PPPPPRAS

7.08

-3.33

-2.75

Q01560

YYPPPPPG

10.47

-3.35

-2.77

PEPQPYYP

10.53

-3.66

-3.08

YPPPPPGE

11.40

-3.21

-2.63

P00950

DVPPPPID

11.05

-2.70

-2.12

FDVPPPPI

11.06

-3.49

-2.91

VPPPPIDA

12.17

-2.96

-2.38

P53735

VPPPPRTR

6.96

-3.22

-2.64

KLVPPPPR

10.29

-4.36

-3.78

LVPPPPRT

10.50

-2.97

-2.39

P33334

SKMPTRFP

3.79

-4.07

-3.49

KMPTRFPP

10.38

-3.72

-3.14

PPPPGFEE

10.41

-5.06

-4.48

P40523

MHNSPRNP

9.57

-2.14

-1.56

VGVPPLAP

10.27

-4.28

-3.70

LAPPPHGP

11.38

-2.96

-2.38

P40563

RAPPPVPK

10.90

-2.84

-2.26

PSERPKRR

11.21

-2.95

-2.37

RRAPPPVP

11.54

-2.48

-1.90

Q08989

KGPPPPPP

10.79

-3.13

-2.55

PPPPPPPP

12.07

-3.43

-2.85

GPPPPPPP

12.11

-3.20

-2.62

P37370

QMPKPRPF

7.76

-3.03

-2.45

KVPQNRPH

7.87

-2.16

-1.58

HMPSVRPA

8.20

-2.60

-2.02

P39743

ATIPEDNP

11.94

-2.54

-1.96

Q03900

PSGAPKLK

12.83

-0.89

-0.31

 


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