ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-10.PDB
Scoring matrix: MYO5_1RUW-10_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 8.82
Foldx random average score for Saccharomyces cerevisiae: 14.474

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 2042564
Proteins after disorder filtering: 4833
 Total fragments: 140612
Proteins after pattern filtering: 2311
 Total fragments: 13017
Proteins after MINT filtering: 45
 Total fragments: 809

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

8.82

2.03

0.00

Best peptides

ARRVGWWR

0.00

-0.84

-2.87

         
Interactors      
P53145

PGQPPLIN

11.60

-1.90

-3.93

PLLPPLPG

12.83

-0.35

-2.38

LLPPLPGQ

13.63

2.26

0.23

P39113

MSPLGAPP

9.80

-0.60

-2.63

PRRPQKNR

9.96

1.61

-0.42

THPEGPNC

10.52

0.87

-1.16

P40073

PQQQPSHT

10.96

-0.76

-2.79

GYPQQQPS

13.60

2.82

0.79

P25604

QDQAPSLP

9.95

-1.48

-3.51

PKPKSPHL

10.94

-0.40

-2.43

EQNTPPLP

11.24

-2.06

-4.09

P25623

ASDTPPLP

8.23

-0.02

-2.05

PKTVPISI

11.00

-1.04

-3.07

ISQPPLQP

11.28

-0.94

-2.97

Q05933

FTLPGTPG

9.69

-0.12

-2.15

FRGPAYPS

10.01

-1.11

-3.14

PGTPGFPL

10.75

0.02

-2.01

P53094

AFPQSPIR

7.01

-1.31

-3.34

PLKLPPLP

9.74

-2.05

-4.08

EDPVSPKP

10.69

0.21

-1.82

Q12451

PWLPPTDT

11.45

0.41

-1.62

PHLLPWLP

11.52

-0.75

-2.78

KHAPPPVP

11.83

-0.74

-2.77

P15891

AAPPPPPR

8.70

-2.00

-4.03

AQPPLPSR

9.82

2.41

0.38

RATPEKKP

9.92

-0.26

-2.29

P48562

QFPRGPMH

5.94

-2.43

-4.46

GVAKPKKP

8.58

-1.70

-3.73

VQPVAPKN

8.67

-0.63

-2.66

P40341

RNIPPPPP

11.16

-1.05

-3.08

PLNDPSNP

11.56

-2.58

-4.61

NIPPPPPP

13.81

-2.20

-4.23

Q08912

GDHPKGPP

11.35

2.87

0.84

CYTPSWGP

12.20

1.30

-0.73

DHPKGPPP

12.36

-0.81

-2.84

P17555

PAPPASVF

10.09

0.35

-1.68

KSGPPPRP

10.19

-2.94

-4.97

PKKPSTLK

10.79

-0.15

-2.18

Q12342

AKAPPPPP

9.64

-1.07

-3.10

KAPPPPPP

12.61

-1.67

-3.70

KAKAPPPP

13.39

-2.50

-4.53

P47068

ALSAPSIP

7.58

-1.41

-3.44

YVPPGIPT

8.28

-0.93

-2.96

ALSAPSVP

8.35

-0.99

-3.02

P38822

PEVPPPRR

8.13

-2.24

-4.27

RGPAPEVP

11.24

-0.93

-2.96

GDTPTTTP

12.61

5.44

3.41

P04050

GYSPGSPA

7.49

0.63

-1.40

PTSPGYSP

8.58

0.01

-2.02

VSSPGFSP

9.08

-0.20

-2.23

P40450

AVPPPPPP

10.01

-1.95

-3.98

GAVPPPPP

10.58

-2.03

-4.06

PKLFPRLS

10.85

-1.12

-3.15

P40453

PEIPPPLP

9.84

-1.44

-3.47

RKRPPPPP

10.22

-3.27

-5.30

PEPPSWKP

10.60

-1.05

-3.08

Q12168

PNRPGGTT

8.91

0.27

-1.76

NRGPPPLP

10.91

-2.21

-4.24

PYFPQFRS

11.54

0.49

-1.54

P41832

GDSPAPPP

7.87

0.15

-1.88

GETPPPPP

10.04

-1.41

-3.44

GVIPPAPP

10.48

-0.04

-2.07

P36006

PKNPGGLS

7.37

-1.15

-3.18

GQPKDPKF

9.24

2.66

0.63

PMGQPKDP

12.20

-0.64

-2.67

P38753

ANNTPVMP

7.98

-1.00

-3.03

AHISPPVP

10.08

0.71

-1.32

PVMPPQRQ

11.32

-2.10

-4.13

P38237

PFVPPPNV

10.47

-2.12

-4.15

FVPPPNVP

10.89

-2.72

-4.75

TFPEPEVP

12.19

-0.32

-2.35

P34245

STPFGPWP

7.45

-1.57

-3.60

AYSTPFGP

9.21

-1.60

-3.63

GPWPGPAE

10.52

-1.79

-3.82

Q01389

GEEAPTKP

8.66

-0.95

-2.98

GRRYPQTP

8.88

-0.12

-2.15

ASPPASPS

9.37

0.69

-1.34

Q03306

GRLPNSAP

9.46

2.35

0.32

ASSEPSSP

10.34

0.14

-1.89

GTVPSTTP

10.41

2.56

0.53

P34758

GGLQPLKP

9.31

-0.68

-2.71

QLPLEPLK

9.65

0.83

-1.20

HLPPPPPP

11.48

-0.86

-2.89

P53933

RVAPPPLP

8.53

-2.58

-4.61

RRRPPPPP

9.77

-3.53

-5.56

RRPPPPPI

10.45

-3.53

-5.56

P32381

LTEPPMNP

10.06

-0.30

-2.33

Q00453

PMPSAPIP

9.04

-1.50

-3.53

LYAPPYFP

9.37

-0.08

-2.11

PIPLPHQP

11.07

-1.89

-3.92

P40021

PLPPPLFP

9.81

-2.39

-4.42

YVISPNLP

10.04

-1.04

-3.07

PLPPPARS

10.14

-2.53

-4.56

P36150

IVVNPSSP

12.51

-2.06

-4.09

Q04439

ARPSPPTA

8.88

0.58

-1.45

ANIPPPPP

10.04

-1.56

-3.59

SKPKEPMF

11.30

0.68

-1.35

Q12446

ALPPASPE

8.08

-0.18

-2.21

GGTPGGPP

8.20

0.70

-1.33

RRGPAPPP

8.64

-1.85

-3.88

Q01560

QEPPAPQE

8.59

-1.08

-3.11

QAPDAPQE

10.35

-1.85

-3.88

HQPPEPQP

10.87

1.79

-0.24

P00950

FDVPPPPI

11.35

-1.47

-3.50

DVPPPPID

11.43

-1.24

-3.27

SFDVPPPP

13.00

-0.68

-2.71

P53735

KLVPPPPR

9.64

-2.73

-4.76

LVPPPPRT

9.68

-2.56

-4.59

PKLVPPPP

12.34

-3.45

-5.48

P33334

AIPGGPKF

5.11

-1.90

-3.93

ALPPPPPP

9.27

-2.20

-4.23

GLPPPPPG

10.05

-2.39

-4.42

P40523

GAPPGTVP

6.11

0.10

-1.93

PLAPPPHG

9.51

-0.83

-2.86

PVPVGVPP

10.08

-1.72

-3.75

P40563

MVNPGQLP

6.84

-2.82

-4.85

RRAPPPVP

8.34

-2.68

-4.71

PSERPKRR

9.76

-3.13

-5.16

Q08989

GDHPKGPP

11.35

2.87

0.84

DHPKGPPP

12.36

-0.81

-2.84

PKGPPPPP

12.72

-1.90

-3.93

P37370

AVTPGGPL

7.28

-0.60

-2.63

ATSVPSAP

8.67

-0.36

-2.39

VTPGGPLP

8.72

0.13

-1.90

P39743

ATIPEDNP

8.99

2.11

0.08

YSNPLTSP

13.91

2.63

0.60

Q03900

GSHLPNTP

10.54

-0.51

-2.54

NTPSGAPK

11.90

0.75

-1.28

PSGAPKLK

11.95

-1.77

-3.80

 


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