ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1R6S-23.PDB
Scoring matrix: MYO5_1R6S-23_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 13.14
Foldx random average score for Saccharomyces cerevisiae: 10.066

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1353381
Proteins after disorder filtering: 4480
 Total fragments: 55820
Proteins after pattern filtering: 1836
 Total fragments: 6958
Proteins after MINT filtering: 42
 Total fragments: 492

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

13.14

-0.58

0.00

Best peptides

RPLIPWH

0.00

-4.07

-3.49

         
Interactors      
P53145

EPLLPPL

7.36

-4.52

-3.94

PLLPPLP

8.50

-4.30

-3.72

LPPLPGQ

8.95

-3.87

-3.29

P39113

RGPRRPQ

6.05

-3.22

-2.64

GPRRPQK

7.97

-2.57

-1.99

PPPPPHK

8.26

-2.24

-1.66

P40073

YPQQQPS

9.38

-1.42

-0.84

PQQQPSH

9.85

-2.05

-1.47

P25604

KSPHLKP

7.13

-3.12

-2.54

KPPLPPP

7.57

-3.62

-3.04

KPKSPHL

7.61

-2.69

-2.11

P25623

KPLPVEP

6.44

-3.29

-2.71

TPPLPPH

7.34

-2.83

-2.25

PPLPPHA

7.92

-3.37

-2.79

Q05933

FTLPGTP

8.81

-3.73

-3.15

FRGPAYP

9.46

-0.15

0.43

RGPAYPS

9.85

-1.80

-1.22

P53094

YPLKLPP

6.28

-3.75

-3.17

LKLPPLP

7.83

-4.51

-3.93

KLPPLPL

7.91

0.13

0.71

Q12451

PHLLPWL

5.53

-4.77

-4.19

HLLPWLP

7.43

-2.71

-2.13

APKHAPP

9.20

-1.71

-1.13

P15891

KPEVPED

7.65

-2.52

-1.94

PPPPPRR

8.21

-3.31

-2.73

PPLPSRN

8.29

-3.22

-2.64

P48562

NPYRPHH

6.53

-1.50

-0.92

RGPMHPN

6.82

-3.67

-3.09

KPPISAP

6.95

-3.50

-2.92

P40341

RNIPPPP

6.33

-2.42

-1.84

KPPLNDP

8.54

-4.12

-3.54

PPPPPPK

9.17

-3.56

-2.98

Q08912

KGPPPPP

8.45

-1.65

-1.07

PPPPDEK

9.33

-4.18

-3.60

P17555

RPKKPST

7.23

-3.05

-2.47

PPPRPKK

7.56

-3.85

-3.27

PPRPKKP

9.23

-1.52

-0.94

Q12342

KAPPPPP

8.32

-2.00

-1.42

P47068

RAPPVPP

7.96

-2.03

-1.45

APSPPPH

8.61

-1.03

-0.45

PSPPPHQ

8.79

-2.60

-2.02

P38822

PEVPPPR

9.53

-2.18

-1.60

APEVPPP

10.01

-0.60

-0.02

P04050

PPVRPSI

9.34

-2.84

-2.26

TCLPVPP

9.50

-2.41

-1.83

VPPPPVR

9.66

-1.67

-1.09

P40450

PKLFPRL

7.64

-5.76

-5.18

PPLPESL

8.10

-3.96

-3.38

PPLPQSL

8.41

-4.18

-3.60

P40453

RKRPPPP

6.64

-3.56

-2.98

RPPPPPP

7.23

-1.63

-1.05

PDLPIRL

7.31

-3.47

-2.89

Q12168

RGPPPLP

7.28

-2.41

-1.83

PPLPPRA

7.97

-4.38

-3.80

PPPLPPR

8.61

-4.15

-3.57

P41832

PPAPPMM

8.65

-2.61

-2.03

PPMMPAS

8.72

-5.43

-4.85

PPLPSVL

8.75

-3.91

-3.33

P36006

IPIPPPP

8.28

-4.10

-3.52

NIPIPPP

8.60

-1.06

-0.48

KPKNPGG

9.06

-3.29

-2.71

P38753

TPVMPPQ

7.96

-2.76

-2.18

NLPIQHP

8.09

-1.25

-0.67

YPSNLPI

8.33

-1.75

-1.17

P38237

FQIPSKP

7.51

-3.95

-3.37

PPNVPKK

8.63

-2.30

-1.72

IPSKPEN

9.66

-1.62

-1.04

P34245

YSTPFGP

9.09

-1.27

-0.69

FGPWPGP

9.22

-2.43

-1.85

TPFGPWP

10.00

-0.72

-0.14

Q01389

KPLPPQL

5.65

-3.11

-2.53

RSKPLPP

7.55

-2.43

-1.85

YPQTPSY

7.85

-1.94

-1.36

Q03306

KPNVPPL

7.23

-2.88

-2.30

KPFRIPS

7.83

-1.92

-1.34

PPLPQME

7.99

-2.61

-2.03

P34758

LPLEPLK

7.83

-4.91

-4.33

QHLPPPP

8.59

-2.93

-2.35

QQLPLEP

8.81

-3.80

-3.22

P53933

RRRPPPP

6.61

-3.32

-2.74

RPPPPPI

6.83

-2.47

-1.89

RRPPPPP

7.27

-2.93

-2.35

P32381

EPPMNPL

8.79

-2.88

-2.30

Q00453

YFPHPMP

5.54

-3.37

-2.79

APIPLPH

7.29

-2.37

-1.79

YAPPYFP

7.70

-3.39

-2.81

P40021

HPPNHPH

7.54

-2.31

-1.73

PPLPPPL

7.66

-4.24

-3.66

PPLPPPA

8.83

-3.02

-2.44

Q04439

KPKEPMF

7.14

-3.54

-2.96

RPSPPTA

8.48

0.43

1.01

KPAPPPP

8.51

-0.75

-0.17

Q12446

RPLPQLP

5.81

-5.65

-5.07

HSLPPLP

6.85

-2.15

-1.57

FPIPEIP

7.57

-4.16

-3.58

Q01560

YYPPPPP

7.83

-2.38

-1.80

YPPPPPG

8.03

-2.34

-1.76

PPPPGEH

8.51

-0.08

0.50

P00950

FDVPPPP

9.07

-3.52

-2.94

P53735

PKLVPPP

8.23

-4.24

-3.66

KLVPPPP

8.75

-1.75

-1.17

LVPPPPR

9.16

-2.54

-1.96

P33334

FTLPPPP

7.51

-4.11

-3.53

TFLPPPP

8.34

-2.64

-2.06

LALPPPP

8.41

-3.55

-2.97

P40523

TPLPTPV

8.84

-1.66

-1.08

PLAPPPH

9.07

-0.82

-0.24

PPPHGPF

9.46

-1.57

-0.99

P40563

TPKVPER

7.38

-3.31

-2.73

PSERPKR

8.00

-2.23

-1.65

RAPPPVP

8.12

-0.52

0.06

Q08989

KGPPPPP

8.45

-1.65

-1.07

PPPPDEK

9.33

-4.18

-3.60

P37370

RPHMPSV

6.36

-3.71

-3.13

PPIPTSH

7.60

-3.12

-2.54

PKPRPFQ

7.84

-3.46

-2.88

 


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