ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-16.PDB
Scoring matrix: MYO3_1ZUY-16_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.58
Foldx random average score for Saccharomyces cerevisiae: 16.381

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1714036
Proteins after disorder filtering: 4681
 Total fragments: 111799
Proteins after pattern filtering: 2202
 Total fragments: 11308
Proteins after MINT filtering: 26
 Total fragments: 426

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.58

1.69

0.00

Best peptides

RFPINSRRF

0.00

-3.52

-5.21

         
Interactors      
P39113

ASHRGPRRP

10.72

-1.78

-3.47

MSPLGAPPP

12.43

-3.86

-5.55

PRRPQKNRY

12.43

-3.15

-4.84

P36150

PIVVNPSSP

13.62

-2.49

-4.18

P38822

RGPAPEVPP

13.89

-1.17

-2.86

VGDTPTTTP

14.41

-1.07

-2.76

APEVPPPRR

14.76

-2.85

-4.54

P40341

KPPLNDPSN

13.66

-3.50

-5.19

SRNIPPPPP

14.20

-2.91

-4.60

PLNDPSNPV

15.11

0.50

-1.19

Q08912

YTPSWGPSP

12.38

-2.13

-3.82

VCYTPSWGP

12.99

-1.27

-2.96

DHPKGPPPP

14.72

-2.07

-3.76

P17555

RPKKPSTLK

11.03

-3.90

-5.59

SKSGPPPRP

13.86

-0.96

-2.65

P25604

LPPKPKSPH

13.66

-2.71

-4.40

PKPKSPHLK

13.92

-1.73

-3.42

PQDQAPSLP

14.23

-2.47

-4.16

P47068

YHPMPNTAP

8.65

-4.26

-5.95

PFVDPSSNP

10.69

-1.83

-3.52

GNVLPVSSP

12.09

-2.99

-4.68

P04050

PPVRPSISF

11.29

-2.75

-4.44

AYSPTSPSY

12.99

-2.55

-4.24

GFSPTSPTY

13.03

-1.83

-3.52

P40450

PPPLPDLFK

14.58

-2.71

-4.40

VSSSPKLFP

14.83

-0.05

-1.74

KLPQLPPPP

15.08

-2.20

-3.89

P40453

RLRKRPPPP

11.21

-3.55

-5.24

DCPRCGPTA

12.85

-0.27

-1.96

LRKRPPPPP

13.89

-2.82

-4.51

P41832

PPPLPSVLS

14.87

-3.01

-4.70

TGDSPAPPP

15.72

-0.37

-2.06

LSSQPPPPP

15.89

-2.78

-4.47

Q12342

RKAKAPPPP

11.93

-3.02

-4.71

P38237

NFQIPSKPE

13.62

-1.79

-3.48

ENFQIPSKP

14.64

-0.23

-1.92

DLNDPFVPP

15.08

-0.94

-2.63

P53094

AFPQSPIRA

12.42

-1.69

-3.38

PLPPQTREP

13.74

-2.18

-3.87

PQTREPNEP

13.98

-2.36

-4.05

Q01389

RYPQTPSYY

10.51

-3.12

-4.81

YPQTPSYYY

11.61

-2.07

-3.76

NIPSPSSSP

12.32

-1.21

-2.90

P40021

LDFLPSTPS

13.05

-2.65

-4.34

PLPPPARSQ

13.09

-1.61

-3.30

NYVISPNLP

13.29

-2.86

-4.55

Q04439

RHSKKPAPP

12.68

-2.67

-4.36

HSKKPAPPP

13.93

-2.39

-4.08

GSGSPSELP

14.00

0.57

-1.12

Q12446

PFPVPQQQF

10.39

-3.41

-5.10

RNNRPVPPP

11.89

-2.01

-3.70

SQPQSNPFP

12.00

-1.00

-2.69

Q01560

PEPQPYYPP

13.91

-1.98

-3.67

PPPSNAPIY

14.43

-1.68

-3.37

HHQPPEPQP

14.48

-0.77

-2.46

P00950

RSFDVPPPP

15.85

-1.76

-3.45

P33334

LFFDPSLNP

10.87

-2.18

-3.87

GGPKFEPLY

13.15

-1.26

-2.95

DFTLPPPPP

13.34

-4.08

-5.77

P40523

GGPLASPTH

11.42

-2.28

-3.97

YMHNSPRNP

11.47

-3.78

-5.47

ENITPLPTP

12.19

-1.16

-2.85

Q08989

DHPKGPPPP

14.72

-2.07

-3.76

P37370

RPHMPSVRP

7.88

-4.19

-5.88

VSQMPKPRP

10.69

-2.94

-4.63

APALPGHVP

11.66

-3.89

-5.58

P39743

AYSNPLTSP

12.13

-1.69

-3.38

SNPLTSPVA

12.48

-2.03

-3.72

NATIPEDNP

12.81

-1.69

-3.38

 


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