ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-13.PDB
Scoring matrix: MYO3_1ZUY-13_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 18.0
Foldx random average score for Saccharomyces cerevisiae: 13.839

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1469188
Proteins after disorder filtering: 4500
 Total fragments: 59645
Proteins after pattern filtering: 1961
 Total fragments: 8461
Proteins after MINT filtering: 26
 Total fragments: 324

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

18.00

-2.01

0.00

Best peptides

RKPLFWRH

0.00

-8.52

-6.51

         
Interactors      
P39113

RGPRRPQK

8.54

-5.70

-3.69

SHRGPRRP

12.36

-4.80

-2.79

GPRRPQKN

12.46

-6.82

-4.81

P36150

IVVNPSSP

13.57

-4.59

-2.58

P38822

PEVPPPRR

8.98

-5.91

-3.90

RGPAPEVP

10.87

-5.48

-3.47

P40341

RNIPPPPP

9.66

-5.78

-3.77

PPPKPPLN

12.17

-5.13

-3.12

SRNIPPPP

12.31

-6.85

-4.84

Q08912

PKGPPPPP

13.29

-4.97

-2.96

KGPPPPPP

13.29

-5.18

-3.17

P17555

KSGPPPRP

8.69

-5.92

-3.91

RPKKPSTL

11.03

-5.70

-3.69

PPPRPKKP

12.27

-4.92

-2.91

P25604

TPPLPPKP

10.77

-6.54

-4.53

KPPLPPPP

11.32

-5.91

-3.90

LKPPLPPP

11.40

-6.07

-4.06

P47068

TAPPLPRA

9.71

-7.17

-5.16

RTLPPHVP

10.37

-5.08

-3.07

EDKVPPHP

10.75

-5.30

-3.29

P04050

VPPPPVRP

10.91

-4.42

-2.41

PVPPPPVR

12.16

-6.38

-4.37

CLPVPPPP

12.26

-6.23

-4.22

P40450

SPKLFPRL

7.97

-6.93

-4.92

PKLFPRLS

9.95

-6.97

-4.96

KLPQLPPP

11.14

-6.52

-4.51

P40453

RKRPPPPP

8.38

-6.43

-4.42

PPDLPIRL

9.57

-6.31

-4.30

LRKRPPPP

10.10

-7.77

-5.76

P41832

IPPAPPMM

11.84

-5.40

-3.39

TPPPPPLP

12.80

-4.35

-2.34

SQPPPPPP

13.22

-5.31

-3.30

Q12342

KAPPPPPP

12.31

-5.29

-3.28

KAKAPPPP

12.69

-5.62

-3.61

AKAPPPPP

12.92

-5.53

-3.52

P38237

NFQIPSKP

11.19

-7.09

-5.08

TFPEPEVP

11.70

-5.33

-3.32

FVPPPNVP

11.93

-5.69

-3.68

P53094

PLKLPPLP

8.96

-7.13

-5.12

KLPPLPLT

9.10

-6.70

-4.69

NVPLPPQT

9.92

-7.56

-5.55

Q01389

SKPLPPQL

8.94

-8.06

-6.05

RSKPLPPQ

10.98

-5.17

-3.16

RYPQTPSY

11.07

-4.67

-2.66

P40021

PLPPPARS

8.51

-7.58

-5.57

LDFLPSTP

10.10

-5.91

-3.90

PLPPPLFP

10.83

-6.24

-4.23

Q04439

SKPKEPMF

9.10

-7.30

-5.29

KKPAPPPP

10.87

-6.69

-4.68

SNARPSPP

11.78

-4.22

-2.21

Q12446

LPQLPNRN

7.94

-7.36

-5.35

RNNRPVPP

8.35

-5.06

-3.05

RLPAPPPP

8.70

-7.49

-5.48

Q01560

PEPQPYYP

12.16

-5.06

-3.05

YYPPPPPG

12.23

-7.10

-5.09

PQPYYPPP

13.14

-5.42

-3.41

P00950

SFDVPPPP

12.05

-6.19

-4.18

FDVPPPPI

12.08

-5.48

-3.47

DVPPPPID

12.83

-6.08

-4.07

P33334

MSGLPPPP

10.84

-6.96

-4.95

DLALPPPP

11.11

-7.28

-5.27

FLPPPPPP

11.32

-6.55

-4.54

P40523

PVGVPPLA

12.35

-6.21

-4.20

PLAPPPHG

12.44

-6.07

-4.06

ITPLPTPV

12.52

-4.97

-2.96

Q08989

KGPPPPPP

13.29

-5.18

-3.17

PKGPPPPP

13.29

-4.97

-2.96

P37370

RPHMPSVR

8.44

-6.89

-4.88

SQMPKPRP

9.51

-4.95

-2.94

PKPRPFQN

9.86

-6.84

-4.83

P39743

SNPLTSPV

13.25

-2.28

-0.27

 


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