ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-12.PDB
Scoring matrix: MYO3_1ZUY-12_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.26
Foldx random average score for Saccharomyces cerevisiae: 9.542

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1286211
Proteins after disorder filtering: 4508
 Total fragments: 60676
Proteins after pattern filtering: 2110
 Total fragments: 10675
Proteins after MINT filtering: 25
 Total fragments: 607

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

12.26

-1.07

0.00

Best peptides

YRMKRFWR

0.00

-4.84

-3.77

         
Interactors      
P39113

PRRPQKNR

4.61

-2.58

-1.51

HRGPRRPQ

5.77

-2.60

-1.53

SHRGPRRP

6.97

-3.23

-2.16

P36150

IVVNPSSP

8.69

-2.14

-1.07

P38822

PEVPPPRR

7.92

-4.00

-2.93

RGPAPEVP

9.35

-1.33

-0.26

PAPEVPPP

9.48

-2.28

-1.21

P40341

PPPPPKPP

6.69

-3.50

-2.43

PPKPPLND

7.62

-3.83

-2.76

NIPPPPPP

7.78

-3.26

-2.19

Q08912

KGPPPPPP

7.42

-3.24

-2.17

DHPKGPPP

8.00

-2.75

-1.68

CYTPSWGP

8.74

-3.34

-2.27

P17555

SGPPPRPK

5.31

-4.69

-3.62

PPRPKKPS

6.73

-3.61

-2.54

PRPKKPST

6.86

-2.21

-1.14

P25604

HLKPPLPP

6.01

-3.96

-2.89

PSLPPKPN

6.49

-2.66

-1.59

LPPKPKSP

6.66

-2.71

-1.64

P47068

DKVPPHPV

6.61

-4.07

-3.00

PHVPSLTN

6.83

-4.00

-2.93

NTAPPLPR

6.95

-3.22

-2.15

P04050

PPPPVRPS

6.90

-4.34

-3.27

PAYSPKQD

7.55

-2.25

-1.18

VSSPGFSP

7.78

-2.79

-1.72

P40450

SSPKLFPR

4.47

-4.60

-3.53

PKLFPRLS

6.52

-3.29

-2.22

PAPPPLPD

6.70

-3.90

-2.83

P40453

WKPPDLPI

5.50

-4.12

-3.05

KRPPPPPP

5.89

-3.70

-2.63

RKRPPPPP

6.08

-3.39

-2.32

P41832

PAPPMMPA

6.47

-4.42

-3.35

PPPPPLPS

7.45

-4.57

-3.50

PPPPPMAL

7.66

-4.62

-3.55

Q12342

KAPPPPPP

7.40

-3.35

-2.28

KAKAPPPP

7.76

-2.82

-1.75

AKAPPPPP

8.20

-2.29

-1.22

P38237

FQIPSKPE

6.92

-3.93

-2.86

PFVPPPNV

7.93

-3.90

-2.83

DLNDPFVP

8.74

-3.13

-2.06

P53094

LKLPPLPL

6.46

-4.13

-3.06

DPVSPKPV

7.04

-2.62

-1.55

CYPLKLPP

7.14

-3.01

-1.94

Q01389

KREAPKPP

5.91

-2.77

-1.70

KRSKPLPP

6.36

-3.25

-2.18

GRRYPQTP

6.77

-2.25

-1.18

P40021

LPPPLFPS

6.38

-4.70

-3.63

PLPPPLFP

7.11

-4.55

-3.48

GPPPPLPP

7.36

-3.83

-2.76

Q04439

PKEPMFEA

6.72

-3.31

-2.24

SKPKEPMF

6.98

-2.65

-1.58

SKKPAPPP

7.11

-2.94

-1.87

Q12446

TNPFPFPV

5.77

-3.78

-2.71

SNPFPFPI

5.79

-3.68

-2.61

PPPPHRHV

5.95

-3.60

-2.53

Q01560

YYPPPPPG

7.19

-3.63

-2.56

PEPQPYYP

7.86

-3.77

-2.70

PYYPPPPP

7.88

-3.28

-2.21

P00950

FDVPPPPI

7.50

-3.58

-2.51

DVPPPPID

8.65

-2.65

-1.58

VPPPPIDA

8.99

-2.61

-1.54

P33334

SKMPTRFP

5.23

-4.58

-3.51

KMPTRFPP

5.57

-3.89

-2.82

PPPPGFEE

6.87

-4.93

-3.86

P40523

VGVPPLAP

7.07

-4.57

-3.50

MHNSPRNP

7.92

-2.99

-1.92

SSVTPQPP

7.94

-1.53

-0.46

Q08989

KGPPPPPP

7.42

-3.24

-2.17

DHPKGPPP

8.00

-2.75

-1.68

PPPPPPPP

8.79

-3.38

-2.31

P37370

QMPKPRPF

4.90

-4.47

-3.40

PKPRPFQN

5.70

-4.79

-3.72

QNRPHMPS

6.01

-3.95

-2.88

 


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