ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-11.PDB
Scoring matrix: MYO3_1ZUY-11_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 14.62
Foldx random average score for Saccharomyces cerevisiae: 12.300

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1353511
Proteins after disorder filtering: 4619
 Total fragments: 73695
Proteins after pattern filtering: 2076
 Total fragments: 9478
Proteins after MINT filtering: 25
 Total fragments: 484

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

14.62

-0.62

0.00

Best peptides

YMWRPPR

0.00

-3.85

-3.23

         
Interactors      
P39113

RGPRRPQ

6.44

-4.58

-3.96

GPRRPQK

7.59

-3.28

-2.66

PPPPPHK

10.33

-4.42

-3.80

P25604

TPPLPPK

8.40

-4.71

-4.09

APSLPPK

8.53

-5.10

-4.48

PKSPHLK

8.94

-3.50

-2.88

P38822

PEVPPPR

7.53

-5.50

-4.88

APEVPPP

11.96

-3.96

-3.34

PTTTPGS

12.25

-2.81

-2.19

P40341

RNIPPPP

8.86

-6.38

-5.76

NIPPPPP

9.29

-4.64

-4.02

PPPPPPK

9.91

-5.15

-4.53

Q08912

PKGPPPP

9.93

-4.11

-3.49

KGPPPPP

10.14

-4.57

-3.95

YTPSWGP

10.66

-3.65

-3.03

P17555

PPPRPKK

6.59

-4.62

-4.00

PAPPPPP

10.35

-5.59

-4.97

RPKKPST

10.45

-5.15

-4.53

Q12342

KAPPPPP

9.57

-4.93

-4.31

AKAPPPP

9.87

-4.26

-3.64

PPPPPPP

12.00

-4.10

-3.48

P47068

PLPRAPP

8.23

-3.59

-2.97

TAPPLPR

8.63

-2.88

-2.26

PSSNPFF

10.06

-2.49

-1.87

P04050

PPVRPSI

9.12

-3.36

-2.74

CLPVPPP

9.41

-4.25

-3.63

VPPPPVR

9.53

-2.96

-2.34

P40450

SPKLFPR

8.23

-3.40

-2.78

PKLFPRL

8.27

-4.27

-3.65

QLPPPPP

8.97

-4.57

-3.95

P40453

RKRPPPP

7.58

-7.08

-6.46

PPDLPIR

7.89

-4.77

-4.15

PPPLPPK

8.00

-5.85

-5.23

P41832

PPPVPAK

10.02

-3.73

-3.11

PAPPPPP

10.35

-5.59

-4.97

SQPPPPP

10.51

-4.16

-3.54

P38237

PPNVPKK

10.63

-3.74

-3.12

PFVPPPN

11.12

-4.25

-3.63

QIPSKPE

11.54

-1.21

-0.59

P53094

NVPLPPQ

8.14

-4.47

-3.85

PLKLPPL

8.20

-6.27

-5.65

LKLPPLP

10.08

-3.82

-3.20

Q01389

SKPLPPQ

8.07

-5.47

-4.85

TPSRPVP

9.64

-2.24

-1.62

EPSTPSR

9.72

-3.16

-2.54

P40021

PLPPPAR

7.10

-4.32

-3.70

PLPPPLF

8.94

-4.39

-3.77

PPPLPPP

10.10

-5.43

-4.81

Q04439

KKPAPPP

8.83

-5.76

-5.14

NIPTPPQ

9.21

-4.21

-3.59

NIPPPPP

9.29

-4.64

-4.02

Q12446

LPQLPNR

7.85

-4.59

-3.97

RLPAPPP

7.97

-5.15

-4.53

NRPVPPP

8.58

-4.73

-4.11

Q01560

YYPPPPP

8.06

-5.66

-5.04

PQPYYPP

9.17

-5.19

-4.57

PEPQPYY

9.29

-3.13

-2.51

P00950

FDVPPPP

11.14

-4.32

-3.70

DVPPPPI

11.46

-2.70

-2.08

P33334

MPTRFPP

8.20

-3.40

-2.78

PKFEPLY

9.11

-2.98

-2.36

ALPPPPP

9.88

-4.91

-4.29

P40523

NSPRNPD

8.85

-1.33

-0.71

ITPLPTP

9.16

-4.01

-3.39

PLAPPPH

9.77

-3.59

-2.97

Q08989

PKGPPPP

9.93

-4.11

-3.49

KGPPPPP

10.14

-4.57

-3.95

PPPPPPP

12.00

-4.10

-3.48

P37370

PKPRPFQ

6.04

-4.29

-3.67

PQNRPHM

6.66

-4.21

-3.59

QMPKPRP

7.71

-5.43

-4.81

P39743

PLTSPVA

12.14

-2.41

-1.79

 


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