ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-1.PDB
Scoring matrix: MYO3_1ZUY-1_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.06
Foldx random average score for Saccharomyces cerevisiae: 17.723

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1440718
Proteins after disorder filtering: 4302
 Total fragments: 71695
Proteins after pattern filtering: 2252
 Total fragments: 17973
Proteins after MINT filtering: 26
 Total fragments: 911

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

21.06

-3.92

0.00

Best peptides

RRSRRRRDRY

0.00

-5.24

-1.32

         
Interactors      
P39113

GPRRPQKNRY

9.98

-9.26

-5.34

HRGPRRPQKN

11.13

-7.44

-3.52

PLGAPPPPPH

12.13

-10.05

-6.13

P36150

NPIVVNPSSP

16.40

-6.25

-2.33

P38822

DRGPAPEVPP

12.23

-7.62

-3.70

APEVPPPRRS

13.48

-8.89

-4.97

PAPEVPPPRR

15.56

-8.32

-4.40

P40341

SRNIPPPPPP

10.23

-8.56

-4.64

RNIPPPPPPP

10.28

-8.03

-4.11

IPPPPPPPPP

11.46

-9.56

-5.64

Q08912

PKGPPPPPPP

12.00

-8.83

-4.91

DHPKGPPPPP

12.33

-7.75

-3.83

HPKGPPPPPP

12.69

-9.22

-5.30

P17555

SKSGPPPRPK

12.10

-7.41

-3.49

APPPPPPAPP

12.99

-8.94

-5.02

RPKKPSTLKT

13.04

-6.73

-2.81

P25604

LKPPLPPPPP

10.96

-8.99

-5.07

HLKPPLPPPP

11.78

-9.67

-5.75

KPPLPPPPPP

11.78

-10.20

-6.28

P47068

PLPRAPPVPP

10.73

-11.32

-7.40

MPNTAPPLPR

12.56

-9.96

-6.04

TAPPLPRAPP

13.07

-6.32

-2.40

P04050

LPVPPPPVRP

11.38

-10.27

-6.35

CLPVPPPPVR

12.95

-9.56

-5.64

VPPPPVRPSI

13.71

-6.74

-2.82

P40450

KLPQLPPPPP

11.15

-10.43

-6.51

LPQLPPPPPP

11.74

-10.40

-6.48

LPPPPPPPPP

11.78

-9.68

-5.76

P40453

IRLRKRPPPP

5.95

-9.57

-5.65

LRKRPPPPPP

6.80

-9.51

-5.59

RLRKRPPPPP

7.03

-11.00

-7.08

P41832

VLSSQPPPPP

11.44

-9.91

-5.99

QPPPPPPPPP

12.14

-8.83

-4.91

APPPPPPPPP

12.65

-9.02

-5.10

Q12342

RKAKAPPPPP

7.55

-8.51

-4.59

AKAPPPPPPP

11.62

-8.54

-4.62

APPPPPPPPP

12.65

-9.02

-5.10

P38237

DPFVPPPNVP

13.47

-9.44

-5.52

DLNDPFVPPP

13.92

-8.37

-4.45

DPDLNDPFVP

15.40

-7.85

-3.93

P53094

YPLKLPPLPL

11.68

-9.65

-5.73

TREPNEPPPP

11.79

-7.05

-3.13

VLNVPLPPQT

12.12

-9.52

-5.60

Q01389

KRSKPLPPQL

8.32

-8.97

-5.05

RRYPQTPSYY

11.30

-6.05

-2.13

APKREAPKPP

11.56

-9.42

-5.50

P40021

TKNTGPPPPL

11.63

-8.91

-4.99

VLNSPPLPPP

12.44

-10.33

-6.41

LNSPPLPPPA

13.09

-7.63

-3.71

Q04439

RHSKKPAPPP

10.87

-6.59

-2.67

RQANIPPPPP

11.19

-6.59

-2.67

IPPPPPPPPP

11.46

-9.56

-5.64

Q12446

RRGPAPPPPP

7.94

-8.71

-4.79

RNNRPVPPPP

9.08

-9.02

-5.10

TKHKAPPPPP

9.24

-9.08

-5.16

Q01560

QPYYPPPPPG

13.56

-9.53

-5.61

VPPPSNAPIY

13.60

-7.30

-3.38

EPQPYYPPPP

13.65

-7.69

-3.77

P00950

RRSFDVPPPP

9.08

-8.60

-4.68

RSFDVPPPPI

13.49

-6.02

-2.10

SFDVPPPPID

16.83

-4.83

-0.91

P33334

MPTRFPPAVF

9.42

-10.09

-6.17

DLALPPPPPP

11.98

-9.96

-6.04

ALPPPPPPPP

12.37

-9.94

-6.02

P40523

VPVGVPPLAP

13.49

-8.90

-4.98

YMHNSPRNPD

13.83

-7.42

-3.50

PLAPPPHGPF

14.14

-7.77

-3.85

Q08989

PKGPPPPPPP

12.00

-8.83

-4.91

DHPKGPPPPP

12.33

-7.75

-3.83

HPKGPPPPPP

12.69

-9.22

-5.30

P37370

IPLAPLPPPP

11.21

-9.53

-5.61

MPAPPPPPPP

11.57

-9.93

-6.01

NPTKSPPPPP

11.74

-9.75

-5.83

P39743

PNATIPEDNP

16.65

-5.97

-2.05

 


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