ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1VA7-3.PDB
Scoring matrix: MYO3_1VA7-3_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 22.38
Foldx random average score for Saccharomyces cerevisiae: 20.602

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7178
 Total fragments: 1627001
Proteins after disorder filtering: 4588
 Total fragments: 123687
Proteins after pattern filtering: 2306
 Total fragments: 18832
Proteins after MINT filtering: 26
 Total fragments: 883

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

22.38

5.48

0.00

Best peptides

TRGRWFWPKP

0.00

-2.02

-7.50

         
Interactors      
P39113

SPLGAPPPPP

9.44

-6.18

-11.66

SASHRGPRRP

13.39

-2.14

-7.62

PLGAPPPPPH

13.68

-7.21

-12.69

P36150

PIVVNPSSPS

15.31

-5.77

-11.25

NPIVVNPSSP

16.29

-6.44

-11.92

P38822

DRGPAPEVPP

10.34

-4.97

-10.45

NDRGPAPEVP

13.64

-4.23

-9.71

SVGDTPTTTP

14.52

-3.12

-8.60

P40341

SRNIPPPPPP

9.22

-3.66

-9.14

NSRNIPPPPP

14.46

-6.55

-12.03

NNSRNIPPPP

15.66

-3.62

-9.10

Q08912

PKGPPPPPPP

8.58

-8.39

-13.87

TPSWGPSPMG

11.28

-5.80

-11.28

THGDHPKGPP

11.90

-5.88

-11.36

P17555

SKSGPPPRPK

8.29

-4.28

-9.76

TAAPAPPPPP

13.21

-5.39

-10.87

PRPKKPSTLK

13.38

-6.69

-12.17

P25604

PKPKSPHLKP

10.94

-5.45

-10.93

SPHLKPPLPP

11.46

-6.74

-12.22

PHLKPPLPPP

11.60

-7.04

-12.52

P47068

SRTLPPHVPS

11.57

-2.32

-7.80

THSHTAPSPP

12.42

-5.14

-10.62

PEDKVPPHPV

12.77

-4.82

-10.30

P04050

PPVRPSISFN

13.37

-3.90

-9.38

SPSYSPTSPA

13.79

-3.43

-8.91

SPSYSPTSPG

13.93

-4.21

-9.69

P40450

TCGAVPPPPP

11.22

-5.83

-11.31

SVSSSPKLFP

13.06

-4.77

-10.25

PQLPPPPPPP

13.91

-4.93

-10.41

P40453

LRKRPPPPPP

6.96

-5.88

-11.36

IRLRKRPPPP

8.62

-7.37

-12.85

PPSWKPPDLP

10.23

-8.29

-13.77

P41832

PKGETPPPPP

8.73

-6.56

-12.04

SPAPPPPPPP

11.71

-6.57

-12.05

TTGDSPAPPP

12.61

-6.00

-11.48

Q12342

RKAKAPPPPP

7.26

-5.84

-11.32

AKAPPPPPPP

13.17

-5.18

-10.66

KAKAPPPPPP

15.50

-6.73

-12.21

P38237

DLNDPFVPPP

14.40

-4.56

-10.04

DPFVPPPNVP

14.52

-6.54

-12.02

DPDLNDPFVP

15.44

-5.80

-11.28

P53094

TREPNEPPPP

9.48

-6.08

-11.56

PQTREPNEPP

9.79

-5.81

-11.29

FKSSAFPQSP

14.06

-1.24

-6.72

Q01389

TKSASPPASP

8.99

-6.22

-11.70

SPSSSPPPIP

10.80

-6.47

-11.95

PKREAPKPPA

11.65

-4.82

-10.30

P40021

TKNTGPPPPL

10.71

-5.83

-11.31

NTGPPPPLPP

13.50

-5.61

-11.09

SLDFLPSTPS

14.71

-4.66

-10.14

Q04439

SRHSKKPAPP

8.68

-2.70

-8.18

SKKPAPPPPG

10.79

-5.25

-10.73

RHSKKPAPPP

11.23

-3.06

-8.54

Q12446

TKHKAPPPPP

5.27

-7.93

-13.41

PRRGPAPPPP

7.53

-7.40

-12.88

PPRRGPAPPP

8.12

-5.81

-11.29

Q01560

PPEPQPYYPP

13.44

-5.08

-10.56

EPQPYYPPPP

13.99

-5.89

-11.37

PQESAPQEPP

14.27

-5.27

-10.75

P00950

RRSFDVPPPP

11.90

-6.53

-12.01

SFDVPPPPID

14.94

-4.29

-9.77

RSFDVPPPPI

17.94

-4.05

-9.53

P33334

SKMPTRFPPA

12.05

-2.53

-8.01

MPTRFPPAVF

12.24

-6.79

-12.27

TFLPPPPPPP

13.00

-5.40

-10.88

P40523

PPHGPFSTSM

12.77

-5.98

-11.46

NITPLPTPVP

13.15

-4.28

-9.76

TPLPTPVPVP

13.27

-7.23

-12.71

Q08989

PKGPPPPPPP

8.58

-8.39

-13.87

TNGDHPKGPP

12.80

-6.68

-12.16

HPKGPPPPPP

13.06

-5.85

-11.33

P37370

NPTKSPPPPP

8.54

-8.77

-14.25

TKSPPPPPSP

9.41

-6.88

-12.36

SKNPTKSPPP

10.00

-0.91

-6.39

P39743

PNATIPEDNP

15.36

-4.13

-9.61

PAYSNPLTSP

17.24

-5.53

-11.01

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER