ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1VA7-2.PDB
Scoring matrix: MYO3_1VA7-2_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.63
Foldx random average score for Saccharomyces cerevisiae: 20.326

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1441774
Proteins after disorder filtering: 4504
 Total fragments: 94495
Proteins after pattern filtering: 2294
 Total fragments: 20770
Proteins after MINT filtering: 26
 Total fragments: 1030

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

21.63

-2.72

0.00

Best peptides

FKKRMFRERW

0.00

1.59

4.31

         
Interactors      
P39113

GPRRPQKNRY

11.40

-1.75

0.97

ASHRGPRRPQ

12.77

-2.82

-0.10

PLGAPPPPPH

13.58

-7.09

-4.37

P36150

PIVVNPSSPS

16.10

-4.06

-1.34

NPIVVNPSSP

17.84

-2.72

0.00

P38822

DRGPAPEVPP

12.92

-3.66

-0.94

APEVPPPRRS

15.23

-4.58

-1.86

PAPEVPPPRR

15.97

-4.33

-1.61

P40341

SRNIPPPPPP

11.30

-4.97

-2.25

NIPPPPPPPP

13.01

-5.20

-2.48

PPPPPPPPPK

13.85

-7.96

-5.24

Q08912

PKGPPPPPPP

10.64

-5.38

-2.66

DHPKGPPPPP

11.71

-3.62

-0.90

HPKGPPPPPP

12.15

-9.99

-7.27

P17555

SKSGPPPRPK

10.46

-5.26

-2.54

PRPKKPSTLK

13.22

-4.61

-1.89

APPPPPPAPP

14.27

-8.46

-5.74

P25604

PKPKSPHLKP

11.36

-2.94

-0.22

LKPPLPPPPP

11.70

-4.95

-2.23

PHLKPPLPPP

12.51

-4.04

-1.32

P47068

PLPRAPPVPP

10.86

-7.41

-4.69

DKVPPHPVPS

13.13

-3.78

-1.06

SRTLPPHVPS

13.42

-2.51

0.21

P04050

CLPVPPPPVR

14.50

-5.83

-3.11

LPVPPPPVRP

15.47

-4.95

-2.23

SPSYSPTSPA

15.49

-4.55

-1.83

P40450

QLPPPPPPPP

13.26

-6.52

-3.80

PPPPPPPPPP

14.01

-6.45

-3.73

PPPPPPPPPL

14.44

-6.89

-4.17

P40453

IRLRKRPPPP

7.51

-4.82

-2.10

LRKRPPPPPP

8.07

-7.60

-4.88

RLRKRPPPPP

11.17

-7.16

-4.44

P41832

PKGETPPPPP

11.50

-5.47

-2.75

QPPPPPPPPP

13.25

-8.12

-5.40

APPPPPPPPP

13.87

-6.53

-3.81

Q12342

RKAKAPPPPP

8.06

-4.85

-2.13

AKAPPPPPPP

10.35

-4.84

-2.12

APPPPPPPPP

13.87

-6.53

-3.81

P38237

DPFVPPPNVP

15.01

-3.64

-0.92

DLNDPFVPPP

15.10

-4.06

-1.34

QIPSKPENTV

16.77

-0.58

2.14

P53094

FKSSAFPQSP

10.07

-4.05

-1.33

YPLKLPPLPL

10.66

-6.46

-3.74

PQTREPNEPP

12.03

-4.21

-1.49

Q01389

APKREAPKPP

11.67

-5.95

-3.23

PKREAPKPPA

12.12

-3.96

-1.24

SRPVPPDSSY

13.46

-2.65

0.07

P40021

TKNTGPPPPL

12.03

-4.47

-1.75

FLPSTPSQMN

14.36

-4.18

-1.46

NTGPPPPLPP

14.64

-4.71

-1.99

Q04439

SKPKEPMFEA

10.92

-3.25

-0.53

PKEPMFEAAY

11.86

-3.15

-0.43

SKKPAPPPPG

11.99

-3.27

-0.55

Q12446

TKHKAPPPPP

8.91

-4.80

-2.08

HKAPPPPPPT

9.80

-5.83

-3.11

NRPVPPPPPM

10.74

-5.53

-2.81

Q01560

QPYYPPPPPG

13.57

-6.22

-3.50

PQPYYPPPPP

13.75

-5.01

-2.29

EPQPYYPPPP

13.79

-4.81

-2.09

P00950

RSFDVPPPPI

16.61

-3.62

-0.90

SFDVPPPPID

17.23

-0.60

2.12

RRSFDVPPPP

17.45

-1.47

1.25

P33334

MPTRFPPAVF

9.17

-4.51

-1.79

FTLPPPPPPP

12.48

-3.91

-1.19

FLPPPPPPPS

13.12

-6.26

-3.54

P40523

YMHNSPRNPD

13.93

-3.40

-0.68

PLAPPPHGPF

14.40

-4.55

-1.83

NITPLPTPVP

14.64

-1.74

0.98

Q08989

PKGPPPPPPP

10.64

-5.38

-2.66

DHPKGPPPPP

11.71

-3.62

-0.90

HPKGPPPPPP

12.15

-9.99

-7.27

P37370

NRPHMPSVRP

11.04

-1.41

1.31

PKPRPFQNKT

11.31

-4.22

-1.50

NPTKSPPPPP

11.38

-6.18

-3.46

P39743

PNATIPEDNP

18.30

-2.40

0.32

PAYSNPLTSP

20.07

-1.33

1.39

 


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