ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-9.PDB
Scoring matrix: MYO3_1RUW-9_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.43
Foldx random average score for Saccharomyces cerevisiae: 10.444

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 2006742
Proteins after disorder filtering: 4733
 Total fragments: 82503
Proteins after pattern filtering: 2002
 Total fragments: 6395
Proteins after MINT filtering: 24
 Total fragments: 193

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

12.43

1.66

0.00

Best peptides

YRWMPPWM

0.00

-5.56

-7.22

         
Interactors      
P39113

RGPRRPQK

7.61

-4.24

-5.90

HRGPRRPQ

9.66

-1.36

-3.02

GAPPPPPH

10.14

-3.58

-5.24

P25604

PKPKSPHL

6.29

-2.74

-4.40

QAPSLPPK

8.89

-2.95

-4.61

PLPPKPKS

9.06

-3.70

-5.36

P38822

PEVPPPRR

8.63

-4.04

-5.70

DTPTTTPG

9.23

-1.94

-3.60

P40341

LNDPSNPV

10.44

-1.51

-3.17

Q08912

YTPSWGPS

7.90

-3.29

-4.95

PSWGPSPM

9.73

-2.57

-4.23

P17555

PRPKKPST

8.05

-2.84

-4.50

PKKPSTLK

9.97

-1.86

-3.52

Q12342

ETPSTPSD

9.70

-0.41

-2.07

P47068

PLPRAPPV

8.09

-3.74

-5.40

PEPISPET

8.34

-1.84

-3.50

PSSNPFFR

8.47

-4.15

-5.81

P04050

YSPTSPNY

6.19

-3.08

-4.74

YSPTSPAY

6.76

-2.34

-4.00

YSPTSPSY

6.87

-2.53

-4.19

P40450

PKLFPRLS

8.07

-3.66

-5.32

AAPAPPPL

8.67

-3.36

-5.02

SSPKLFPR

9.04

-2.98

-4.64

P40453

SMPTTPEI

6.76

-3.03

-4.69

PSWKPPDL

7.45

-3.02

-4.68

DCPRCGPT

8.37

-1.19

-2.85

P41832

ETPPPPPL

8.93

-2.36

-4.02

PAPPMMPA

10.00

-3.47

-5.13

P38237

PFVPPPNV

8.37

-2.98

-4.64

FQIPSKPE

9.50

-2.79

-4.45

Q01389

SKPLPPQL

5.86

-5.33

-6.99

RYPQTPSY

6.98

-3.39

-5.05

EAPKPPAN

7.74

-3.59

-5.25

P40021

FLPSTPSQ

6.87

-2.97

-4.63

PLPPPARS

8.62

-5.13

-6.79

ISPNLPTT

9.69

-1.52

-3.18

Q04439

SKPKEPMF

6.88

-3.95

-5.61

ARPSPPTA

7.70

-2.45

-4.11

PAPPPPGM

8.98

-3.35

-5.01

Q12446

SAPIPPTL

7.12

-3.97

-5.63

PFPVPQQQ

7.51

-4.26

-5.92

PLPQLPNR

7.75

-3.43

-5.09

Q01560

YYPPPPPG

6.86

-6.49

-8.15

QEPQVPQE

9.16

-3.21

-4.87

DAPQEPQV

9.35

-2.10

-3.76

P00950

FDVPPPPI

7.50

-3.80

-5.46

DVPPPPID

9.90

-2.64

-4.30

P33334

FDPSLNPI

7.90

-2.44

-4.10

DNPMVPSS

9.10

-2.91

-4.57

GGPKFEPL

9.13

-3.35

-5.01

P40523

PLPTPVPV

6.98

-4.27

-5.93

ITPLPTPV

7.90

-3.90

-5.56

PLASPTHY

8.10

-3.17

-4.83

P53094

LKLPPLPL

6.76

-3.72

-5.38

KLPPLPLT

6.90

-4.01

-5.67

AFPQSPIR

7.83

-3.37

-5.03

P37370

QMPKPRPF

6.27

-5.68

-7.34

PKPRPFQN

6.80

-5.02

-6.68

ATPVPPTL

8.45

-2.71

-4.37

P39743

SNPLTSPV

8.29

-2.80

-4.46

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER