ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-17.PDB
Scoring matrix: MYO3_1RUW-17_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.27
Foldx random average score for Saccharomyces cerevisiae: 17.173

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1482879
Proteins after disorder filtering: 4490
 Total fragments: 61097
Proteins after pattern filtering: 1975
 Total fragments: 6427
Proteins after MINT filtering: 23
 Total fragments: 166

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

17.27

-2.01

0.00

Best peptides

RDWRRGHHF

0.00

-5.00

-2.99

         
Interactors      
P39113

FTHPEGPNC

12.99

-4.16

-2.15

HRGPRRPQK

14.07

-4.38

-2.37

PRRPQKNRY

15.16

-2.97

-0.96

P25604

PPKPKSPHL

15.22

-2.09

-0.08

KSPHLKPPL

15.77

-3.76

-1.75

QNTPPLPPK

15.79

-5.24

-3.23

Q08989

GDHPKGPPP

15.09

-5.54

-3.53

P40341

LNDPSNPVS

17.04

-2.04

-0.03

P17555

RPKKPSTLK

14.00

-6.20

-4.19

SGPPPRPKK

15.70

-3.79

-1.78

PAPPASVFE

16.43

-1.88

0.13

Q08912

YTPSWGPSP

13.58

-5.05

-3.04

PSWGPSPMG

15.02

-2.60

-0.59

GDHPKGPPP

15.09

-5.54

-3.53

P47068

YHPMPNTAP

12.78

-6.17

-4.16

VDPSSNPFF

13.53

-4.25

-2.24

YYVPPGIPT

13.91

-5.17

-3.16

P04050

SYSPTSPNY

14.76

-2.53

-0.52

GEAPTSPGF

14.87

-2.03

-0.02

AYSPTSPSY

15.62

-1.73

0.28

P40450

SSPKLFPRL

12.76

-4.13

-2.12

PAPPPLPDL

14.81

-4.64

-2.63

LVTPPAPPL

14.92

-6.47

-4.46

P40453

PDLPIRLRK

13.77

-3.55

-1.54

WKPPDLPIR

14.28

-4.78

-2.77

DCPRCGPTA

15.40

-1.54

0.47

P41832

PPPPPMALF

16.46

-3.83

-1.82

P38237

NFQIPSKPE

15.96

-2.98

-0.97

FVPPPNVPK

16.07

-5.15

-3.14

LNDPFVPPP

16.69

-4.90

-2.89

P53094

LKLPPLPLT

11.94

-6.18

-4.17

DEDPVSPKP

15.30

-4.34

-2.33

SAFPQSPIR

16.77

-3.91

-1.90

Q01389

RRYPQTPSY

13.30

-7.35

-5.34

KRSKPLPPQ

14.07

-4.27

-2.26

RTEPSTPSR

14.79

-6.15

-4.14

P40021

SHPPNHPHS

12.64

-1.72

0.29

LNSPPLPPP

16.03

-7.04

-5.03

PSTPSQMNY

16.51

-1.68

0.33

Q04439

SSKPKEPMF

11.49

-6.11

-4.10

GSGSPSELP

15.63

-2.39

-0.38

NNNIPTPPQ

16.08

-3.73

-1.72

Q12446

RNNRPVPPP

13.49

-8.74

-6.73

HSLPPLPNQ

14.24

-3.81

-1.80

SQPQSNPFP

14.52

-2.33

-0.32

Q01560

PPPPPGEHM

14.00

-4.09

-2.08

HHQPPEPQP

15.24

-4.87

-2.86

PDAPQEPQV

16.25

-2.20

-0.19

P33334

NAIPGGPKF

11.92

-3.14

-1.13

PSLNPIPHF

12.38

-2.21

-0.20

GGPKFEPLY

12.45

-4.07

-2.06

P40523

LGAPPGTVP

13.92

-5.82

-3.81

LAPPPHGPF

14.61

-5.27

-3.26

HNSPRNPDT

15.48

-2.23

-0.22

P38822

RGPAPEVPP

16.31

-5.40

-3.39

P37370

KVPQNRPHM

9.85

-5.08

-3.07

QMPKPRPFQ

11.86

-5.43

-3.42

AVTPGGPLP

12.22

-5.47

-3.46

P39743

NATIPEDNP

15.34

-5.41

-3.40

YSNPLTSPV

16.39

-3.81

-1.80

 


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