ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1R6S-21.PDB
Scoring matrix: MYO3_1R6S-21_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 16.89
Foldx random average score for Saccharomyces cerevisiae: 14.562

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1783720
Proteins after disorder filtering: 4423
 Total fragments: 69083
Proteins after pattern filtering: 1570
 Total fragments: 3540
Proteins after MINT filtering: 20
 Total fragments: 107

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

16.89

-0.13

0.00

Best peptides

EEEIGMPKMR

0.00

-4.01

-3.88

         
Interactors      
Q12446

RPLPQLPNRN

9.18

-4.26

-4.13

PEIPSTQSAT

11.74

-0.48

-0.35

FPIPEIPSTQ

12.54

-1.93

-1.80

P47068

PEPISPETKK

10.10

-3.81

-3.68

LPEPISPETK

11.65

-1.46

-1.33

VDPSSNPFFR

11.80

-0.63

-0.50

P39113

HRGPRRPQKN

9.43

-0.50

-0.37

PEGPNCTNTN

10.08

-1.16

-1.03

PRRPQKNRYN

12.13

-1.12

-0.99

Q01389

REAPKPPANT

11.11

-1.26

-1.13

RSKPLPPQLL

11.70

-3.10

-2.97

RRYPQTPSYY

12.32

-1.74

-1.61

P04050

GEAPTSPGFG

10.00

-1.77

-1.64

GYSPGSPAYS

11.14

-1.08

-0.95

SYSPTSPNYS

11.27

-2.01

-1.88

P40523

PHGPFSTSML

11.19

-2.16

-2.03

APPGTVPNMQ

12.82

-3.46

-3.33

HNSPRNPDTG

12.98

0.71

0.84

P38237

VPPPNVPKKD

12.12

-3.36

-3.23

FQIPSKPENT

12.25

-0.05

0.08

PSKPENTVNL

13.94

-1.12

-0.99

P40450

PPLPDLFKTK

10.44

-2.23

-2.10

SSPKLFPRLS

12.33

-2.98

-2.85

PPLPESLSMN

12.40

-3.91

-3.78

P40453

PDLPIRLRKR

8.88

-2.82

-2.69

KPPDLPIRLR

13.38

-3.31

-3.18

WKPPDLPIRL

14.31

-3.37

-3.24

P53094

LNVPLPPQTR

10.19

-3.09

-2.96

SAFPQSPIRA

12.43

-2.73

-2.60

AFPQSPIRAY

13.72

-2.06

-1.93

P40021

DFLPSTPSQM

11.62

-2.65

-2.52

PSTPSQMNYD

12.96

-1.49

-1.36

SHPPNHPHSQ

14.21

-0.49

-0.36

Q04439

NNIPTPPQNR

10.84

-2.89

-2.76

SSKPKEPMFE

11.12

-3.15

-3.02

PPPPGMQNKA

11.82

-3.60

-3.47

P37370

QNRPHMPSVR

9.90

-3.18

-3.05

ASAPKVPQNR

10.05

-0.84

-0.71

SPSINPPKQS

10.90

-4.10

-3.97

P40341

LNDPSNPVSK

12.62

-2.49

-2.36

Q01560

PQEPQVPQES

11.76

-0.50

-0.37

PPAPQEQNDV

13.44

-1.64

-1.51

PPPPGEHMHG

13.85

-3.51

-3.38

Q08989

PPPPDEKGRG

13.64

-3.09

-2.96

P17555

PKKPSTLKTK

11.42

-2.57

-2.44

PPRPKKPSTL

12.84

-1.36

-1.23

PRPKKPSTLK

12.94

-3.49

-3.36

P25604

PPKPKSPHLK

10.03

-3.76

-3.63

PPQPASNALD

12.56

-3.52

-3.39

PPKPNTQLQQ

14.41

-2.59

-2.46

P33334

NAIPGGPKFE

9.70

-3.02

-2.89

MPTRFPPAVF

13.50

-2.98

-2.85

LDNPMVPSSV

13.90

-0.27

-0.14

Q12342

LETPSTPSDG

12.94

-0.35

-0.22

 


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