ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1R6S-2.PDB
Scoring matrix: MYO3_1R6S-2_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.5
Foldx random average score for Saccharomyces cerevisiae: 19.474

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1442515
Proteins after disorder filtering: 4494
 Total fragments: 96699
Proteins after pattern filtering: 2283
 Total fragments: 21419
Proteins after MINT filtering: 26
 Total fragments: 1125

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

20.50

-0.65

0.00

Best peptides

HRKRMFRDRW

0.00

-3.26

-2.61

         
Interactors      
P39113

ASHRGPRRPQ

10.50

-6.53

-5.88

HRGPRRPQKN

11.03

-3.73

-3.09

PLGAPPPPPH

12.54

-7.87

-7.22

P36150

PIVVNPSSPS

15.07

-5.93

-5.29

NPIVVNPSSP

16.25

-4.96

-4.31

P38822

DRGPAPEVPP

12.79

-4.43

-3.78

APEVPPPRRS

13.53

-7.26

-6.62

PAPEVPPPRR

14.14

-5.99

-5.35

P40341

SRNIPPPPPP

10.17

-5.32

-4.68

NIPPPPPPPP

11.90

-5.91

-5.27

PPPPPPPPPK

12.27

-9.36

-8.71

Q08912

HPKGPPPPPP

10.60

-8.99

-8.35

PKGPPPPPPP

11.12

-7.19

-6.54

PPPPPPPDEK

13.38

-8.17

-7.53

P17555

SKSGPPPRPK

11.60

-6.45

-5.80

APPPPPPAPP

12.86

-7.72

-7.07

PRPKKPSTLK

13.22

-6.82

-6.18

P25604

PKPKSPHLKP

11.77

-3.81

-3.17

LKPPLPPPPP

12.76

-6.95

-6.30

SPHLKPPLPP

12.96

-7.37

-6.72

P47068

PLPRAPPVPP

10.09

-8.48

-7.84

MPNTAPPLPR

12.78

-9.12

-8.47

SRTLPPHVPS

12.88

-4.44

-3.80

P04050

PPVRPSISFN

12.19

-5.99

-5.35

LPVPPPPVRP

13.88

-6.13

-5.48

SPSYSPTSPA

14.05

-7.09

-6.45

P40450

PPPPPPPPPP

12.28

-6.47

-5.82

QLPPPPPPPP

12.36

-8.01

-7.37

PQLPPPPPPP

12.58

-6.98

-6.34

P40453

IRLRKRPPPP

6.65

-5.79

-5.14

LRKRPPPPPP

7.63

-7.38

-6.73

RLRKRPPPPP

12.56

-7.93

-7.29

P41832

QPPPPPPPPP

11.66

-6.54

-5.89

PKGETPPPPP

11.76

-5.85

-5.21

PPPPPPPPPP

12.28

-6.47

-5.82

Q12342

RKAKAPPPPP

10.87

-6.44

-5.79

AKAPPPPPPP

11.09

-4.50

-3.86

APPPPPPPPP

12.41

-8.21

-7.57

P38237

DLNDPFVPPP

13.93

-4.55

-3.90

DPFVPPPNVP

15.14

-4.67

-4.03

PDLNDPFVPP

15.65

-3.21

-2.56

P53094

PQTREPNEPP

11.14

-6.27

-5.63

FKSSAFPQSP

12.93

-3.60

-2.96

TREPNEPPPP

12.96

-4.04

-3.40

Q01389

APKREAPKPP

10.37

-7.45

-6.80

SPSYPSIFRR

11.82

-6.64

-5.99

SGRRYPQTPS

13.65

-3.11

-2.46

P40021

TKNTGPPPPL

12.56

-5.49

-4.85

PPPLPPPLFP

13.32

-6.82

-6.18

SPPLPPPARS

13.54

-6.30

-5.65

Q04439

NIPPPPPPPP

11.90

-5.91

-5.27

PKEPMFEAAY

12.38

-3.84

-3.19

HSKKPAPPPP

12.39

-3.59

-2.94

Q12446

PPRRGPAPPP

9.97

-8.16

-7.52

NRPVPPPPPM

10.07

-6.35

-5.71

RRGPAPPPPP

10.77

-6.25

-5.61

Q01560

PQPYYPPPPP

11.12

-4.26

-3.61

QPYYPPPPPG

11.61

-9.79

-9.14

EPQPYYPPPP

12.28

-5.19

-4.54

P00950

RSFDVPPPPI

14.82

-3.59

-2.94

DVPPPPIDAS

15.65

-3.51

-2.86

RRSFDVPPPP

16.19

-4.12

-3.48

P33334

MPTRFPPAVF

9.09

-9.05

-8.41

ALPPPPPPPP

13.11

-7.69

-7.04

SKMPTRFPPA

13.25

-3.17

-2.52

P40523

PLAPPPHGPF

13.73

-6.57

-5.93

NITPLPTPVP

14.45

-5.24

-4.60

PPHGPFSTSM

14.82

-5.85

-5.21

Q08989

HPKGPPPPPP

10.60

-8.99

-8.35

PKGPPPPPPP

11.12

-7.19

-6.54

PPPPPPPDEK

13.38

-8.17

-7.53

P37370

PKPRPFQNKT

8.64

-4.50

-3.86

NRPHMPSVRP

9.01

-3.36

-2.71

MPAPPPPPPP

11.47

-7.97

-7.32

P39743

PNATIPEDNP

16.18

-4.62

-3.98

PAYSNPLTSP

18.22

-3.98

-3.34

 


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