ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_CKB-OOT-20.PDB
Scoring matrix: LSB3_CKB-OOT-20_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 18.63
Foldx random average score for Saccharomyces cerevisiae: 14.988

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1335327
Proteins after disorder filtering: 4530
 Total fragments: 78119
Proteins after pattern filtering: 1853
 Total fragments: 5931
Proteins after MINT filtering: 65
 Total fragments: 317


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

18.63

0.20

0.00

Best peptides

FRRRHGFSG

0.00

-2.76

-2.96

         
Interactors      
P38140

MNIQPDLPP

12.97

-3.51

-3.71

NIQPDLPPR

14.50

-4.50

-4.70

Q06604

GPRMPSRGR

11.00

-6.65

-6.85

PAPPVSRST

11.67

-1.23

-1.43

NEEKPLLPT

11.90

-2.05

-2.25

P09119

NSAQVPLTP

14.81

-1.51

-1.71

VPLTPTTSP

14.95

-4.10

-4.30

P24814

NSTRPQMPS

10.61

-1.88

-2.08

IHPNLGPQL

11.47

-1.02

-1.22

HPPDIHPNL

12.61

-2.84

-3.04

P25604

LPPKPNTQL

10.46

-5.95

-6.15

LPPKPKSPH

12.28

-6.08

-6.28

PKSPHLKPP

12.34

-4.29

-4.49

P40956

FWNPKNVPF

14.02

-2.76

-2.96

PPLPRRRAT

14.05

-5.54

-5.74

RFWNPKNVP

14.47

-3.86

-4.06

P25623

PLQPQSKTK

11.52

-5.81

-6.01

EPASPSISL

12.33

-1.60

-1.80

PLPPHATPK

13.11

-3.92

-4.12

P50942

LPPVPALSL

9.07

-4.12

-4.32

RPCPPIRRK

11.55

-6.02

-6.22

ASTKPEKPP

12.00

-3.46

-3.66

Q04322

GNATPSKSP

13.85

-2.45

-2.65

DQAPLDRPQ

14.11

-2.91

-3.11

TPSKSPTSA

14.42

-4.12

-4.32

P38266

PPKPFRRSQ

8.65

-4.92

-5.12

PPPKPFRRS

9.60

-5.56

-5.76

PPPKPFRHG

10.39

-7.22

-7.42

P47043

PTSPQQNSK

12.44

-1.90

-2.10

ESKPPQLPP

14.24

-5.08

-5.28

PQLPPKCSS

14.69

-1.55

-1.75

P15891

KSFTPSKSP

11.26

-3.21

-3.41

RATPEKKPK

11.75

-3.31

-3.51

KEPVKTPSP

13.47

-3.40

-3.60

P53169

SPAQPSASL

11.96

-2.08

-2.28

VPIMPTLPP

12.76

-7.89

-8.09

NSVPIMPTL

13.32

-2.58

-2.78

Q12134

PVPSPMNSQ

14.94

-1.11

-1.31

HQPVPSPMN

14.98

-2.46

-2.66

Q12200

ESCPHLKPL

11.80

-2.25

-2.45

PPSFPSRRC

12.44

-4.98

-5.18

PHLKPLKDG

12.59

-0.02

-0.22

P40494

NQPPNMMPV

14.21

-1.74

-1.94

TSKPTLIPD

14.27

-0.70

-0.90

INQPPNMMP

14.74

-5.61

-5.81

P53238

PPAPTHYNN

11.59

-4.64

-4.84

RPIPPAPTH

14.85

-5.16

-5.36

P32660

DPNRPKVTK

10.32

-4.87

-5.07

DHYPPGYDP

14.02

-2.98

-3.18

DPTDPNRPK

14.47

-1.77

-1.97

P33400

TSPQILPPL

12.77

-1.82

-2.02

PPNAPSYQS

14.69

-1.44

-1.64

VQPPNAPSY

14.77

-2.34

-2.54

P38739

GSPPNDPST

14.82

-1.91

-2.11

Q04749

NPRKPTLST

9.71

-2.55

-2.75

PVLPRRIST

11.35

-2.46

-2.66

SPLPVLPRR

13.03

-3.63

-3.83

P04051

LPHFPKNSK

11.22

-5.19

-5.39

SVNPAMLPG

13.21

-3.23

-3.43

P43603

FTAPTSPST

12.64

-1.53

-1.73

APTSPSTSS

14.45

-1.17

-1.37

P40325

PPPRPQQNP

9.99

-5.73

-5.93

PRPQQNPSL

10.40

-1.19

-1.39

HQSRPHQRP

10.51

-6.52

-6.72

P47129

TLPNRKPNP

12.36

-4.57

-4.77

NTLPNRKPN

12.39

-3.95

-4.15

PNPPPNRSQ

13.56

-4.06

-4.26

P40453

PDLPIRLRK

9.63

-3.82

-4.02

DCPRCGPTA

11.09

-3.54

-3.74

PPPPVSMPT

12.65

-2.84

-3.04

P40095

LPPPRSPNR

10.91

-5.73

-5.93

SPNRPTLSD

12.09

-1.50

-1.70

PDSPSSSSL

13.49

-1.17

-1.37

Q12168

VPNRPGGTT

12.00

-4.22

-4.42

PPPVPNRPG

12.19

-4.60

-4.80

DPYFPQFRS

12.70

-3.83

-4.03

P36125

PAGPQGQRR

10.66

-3.39

-3.59

NDLPAGPQG

11.21

-1.67

-1.87

P32793

PTHPSNMSN

12.51

-2.13

-2.33

GHGPTHPSN

14.74

-2.05

-2.25

P40528

NDIPITPSH

12.93

-1.53

-1.73

P36123

FPPDHFPSR

9.90

-2.97

-3.17

PDHFPSRSQ

11.52

-0.56

-0.76

SYARPGNPL

11.53

-3.65

-3.85

Q08412

PPEPLDTTP

12.98

-3.61

-3.81

LPTQPVRKN

13.15

-5.00

-5.20

KNSRPQQPE

13.89

-2.19

-2.39

P32855

NYSNPSSSP

12.98

-2.82

-3.02

Q06409

STGKPRKTP

11.12

-5.54

-5.74

GKPRKTPRP

12.53

-6.33

-6.53

TGKPRKTPR

13.56

-3.45

-3.65

P32634

PTEPTRYNY

11.97

-3.28

-3.48

PPVPKAPSR

12.33

-5.03

-5.23

LPIVPNPNL

13.49

-5.36

-5.56

Q06833

VPRRPSQPL

10.29

-4.87

-5.07

RRPVPRRPS

10.74

-4.66

-4.86

RPVPRRPSQ

11.10

-4.85

-5.05

P50101

PGSPIDKSI

13.17

-2.57

-2.77

P53118

VENPHDLPS

13.58

-0.92

-1.12

Q12199

NPNNPQCLH

14.10

-2.69

-2.89

P19158

PVSPLGLDT

14.01

-1.04

-1.24

QSSMTPVSP

14.05

-2.80

-3.00

P43638

PKLPSAFRK

10.74

-4.21

-4.41

TSVPTNIPP

13.56

-4.12

-4.32

PDAPKLPSA

13.60

-0.92

-1.12

P53933

NDLPMELPH

11.17

-2.35

-2.55

PPPIPSTQK

13.92

-4.04

-4.24

PPLPNRQLP

14.78

-5.51

-5.71

P32790

PPAMPARPT

11.91

-4.88

-5.08

APLDPFKTG

12.57

-3.06

-3.26

PPRPTSTTS

12.69

-3.20

-3.40

P40020

CVNPHSIPF

11.59

-2.87

-3.07

PSIPVEHSN

12.36

-1.88

-2.08

ISLPPYLSP

12.50

-4.24

-4.44

P10566

TRPIPAIPM

13.29

-2.57

-2.77

P38238

LDPVQSPTN

12.15

-2.54

-2.74

Q06116

NGVKPFYPV

13.56

-1.64

-1.84

NSPELVPRS

13.68

0.33

0.13

Q08229

PVQPGGHYK

12.90

-3.73

-3.93

NDYNPTIPP

13.39

-2.94

-3.14

TPVQPGGHY

13.81

-4.12

-4.32

P38930

PDMVPKHPT

13.68

-2.98

-3.18

FPDMVPKHP

14.11

-7.71

-7.91

QAFPDMVPK

14.34

-2.05

-2.25

Q12446

PPQMPATST

10.94

-3.94

-4.14

PPPRRGPAP

11.52

-7.56

-7.76

QIPQSAPSA

11.69

-2.17

-2.37

Q12211

KRPKSGPRL

7.47

-3.50

-3.70

IDKRPKSGP

14.59

-5.64

-5.84

DKRPKSGPR

14.96

-3.82

-4.02

P33336

PSHPSSNNM

12.60

-2.52

-2.72

TCDPEDYPT

13.92

-0.75

-0.95

P38090

SPNDPDLTA

14.61

-1.13

-1.33

Q06266

YRTVDPYSP

13.03

-4.34

-4.54

YKQQPNCPS

13.68

-1.06

-1.26

IPSSPAFPG

13.89

-2.88

-3.08

Q00916

PRPPLSYKR

10.46

-3.43

-3.63

YKRPTDYPY

11.79

-2.91

-3.11

RLFKPRPPL

12.62

-6.87

-7.07

P07269

LPNTPDFLK

14.20

-4.24

-4.44

NAPDEDPNL

14.38

-0.82

-1.02

PDEDPNLNN

14.64

-0.86

-1.06

P40563

PSERPKRRA

9.12

-3.18

-3.38

NSQPQGPSD

11.99

-0.79

-0.99

PPPVPKKPS

12.78

-4.09

-4.29

P47030

FPPEPSMSS

8.39

-3.07

-3.27

EAFPPEPSM

14.96

-2.19

-2.39

P38289

DVPTNDPSG

13.70

-3.12

-3.32

PENPSFINY

13.82

-2.18

-2.38

P53901

SSSPNSHPH

13.36

-2.19

-2.39

NDPIILPPT

14.86

-3.39

-3.59

P32862

VPSTPSRSN

11.94

-3.52

-3.72

GHMNPSNSP

12.40

-1.07

-1.27

LGGQPQLPP

12.96

-2.79

-2.99

P39743

AYSNPLTSP

12.76

-1.39

-1.59

P31374

SPERPSFRQ

7.87

-4.63

-4.83

NISPERPSF

12.07

-4.88

-5.08

PERPSFRQP

12.80

-6.53

-6.73

P38870

TPERPKRKS

10.77

-4.84

-5.04

TPTTPERPK

14.12

-3.81

-4.01

TTPERPKRK

14.46

-3.22

-3.42

 


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