ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_CKB-OOT-17.PDB
Scoring matrix: LSB3_CKB-OOT-17_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 19.49
Foldx random average score for Saccharomyces cerevisiae: 17.646

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1355104
Proteins after disorder filtering: 4388
 Total fragments: 55081
Proteins after pattern filtering: 1708
 Total fragments: 4977
Proteins after MINT filtering: 61
 Total fragments: 254


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

19.49

-0.83

0.00

Best peptides

FRWRRGMWF

0.00

-0.32

0.51

         
Interactors      
P38140

IPPHPYPSS

17.42

-1.90

-1.06

Q06604

PPSPPAKRI

12.17

-2.78

-1.94

EKGPRMPSR

13.49

-2.91

-2.08

LPTRPNKAE

14.16

-3.20

-2.37

P09119

LTPTTSPVK

16.86

0.25

1.09

AQVPLTPTT

17.00

1.17

2.00

P24814

IHPNLGPQL

17.10

1.09

1.93

NSTRPQMPS

17.50

0.67

1.50

PNLGPQLWL

17.59

0.95

1.78

P25604

LPPKPNTQL

13.44

-2.74

-1.91

PPKPKSPHL

14.88

-2.88

-2.04

PPKPNTQLQ

15.53

-2.08

-1.25

P40956

PPLPRRRAT

13.23

-3.29

-2.46

FWNPKNVPF

15.02

-1.90

-1.06

TSTPPLPRR

16.68

-1.71

-0.88

P25623

PLQPQSKTK

13.66

-1.07

-0.24

PPSTPQQSS

15.56

0.96

1.79

EPASPSISL

16.13

-0.65

0.18

P50942

RPCPPIRRK

11.38

-3.81

-2.98

PPPPTSRHN

14.00

-4.12

-3.29

PPPPPTSRH

14.46

-2.17

-1.34

P38266

PPPKPFRHG

11.24

-3.22

-2.39

PPPKPFRHT

12.22

-3.07

-2.23

PLKPGQKTY

12.41

-4.36

-3.53

P47043

PQLPPKCSS

17.04

-0.43

0.40

DPTSPQQNS

17.47

0.59

1.42

P15891

RATPEKKPK

14.51

-2.26

-1.42

PPPPPRRAT

15.42

-2.28

-1.44

RRATPEKKP

15.61

-0.01

0.82

P38870

TPERPKRKS

14.06

-3.17

-2.34

PTTPERPKR

16.03

-1.84

-1.01

TPTTPERPK

17.10

-0.72

0.11

P40494

PRPPPKPLH

12.52

-2.26

-1.42

PNMMPVTHV

17.11

-1.73

-0.90

Q12200

PPSFPSRRC

14.19

-2.56

-1.73

PHLKPLKDG

15.72

1.50

2.34

SCPHLKPLK

17.29

-4.01

-3.17

Q12344

PPLPPRQNV

14.80

-2.73

-1.90

P53238

RPIPPAPTH

13.28

-2.48

-1.65

IPPAPTHYN

14.59

-2.72

-1.89

PPAPTHYNN

15.29

-2.03

-1.19

P32660

DPNRPKVTK

12.15

-2.38

-1.54

PMSPFEDTF

15.33

-0.98

-0.15

GYDPTDPNR

17.59

-0.58

0.26

P33400

PPNAPSYQS

15.62

0.63

1.46

VQPPNAPSY

16.73

-1.80

-0.97

PNAPSYQSV

17.36

-0.74

0.09

P38739

PPNDPSTLA

17.17

0.10

0.93

Q04749

PVLPRRIST

13.24

-1.82

-0.99

VFNPRKPTL

13.99

-2.83

-2.00

NPRKPTLST

14.03

-0.42

0.41

P04051

LPHFPKNSK

16.40

-2.53

-1.69

SVNPAMLPG

17.50

-0.28

0.55

P43603

FTAPTSPST

16.37

-0.97

-0.14

P40325

RPPRPAANL

14.62

-4.22

-3.38

SRPHQRPST

14.64

-0.68

0.15

YVQPGDPRL

14.72

-1.86

-1.03

P47129

PNPPPNRSQ

17.11

-1.27

-0.44

PLLPPRNTM

17.47

-0.92

-0.09

P40453

PDLPIRLRK

13.61

-1.55

-0.72

DCPRCGPTA

14.43

-1.40

-0.56

PPPPVSMPT

17.21

-0.40

0.43

P40095

LPPPRSPNR

12.59

-4.75

-3.92

PRSPNRPTL

14.29

-1.95

-1.12

SPNRPTLSD

14.77

-0.23

0.60

Q12168

VPNRPGGTT

12.91

-3.00

-2.17

DPYFPQFRS

14.21

-1.81

-0.98

PNRPGGTTN

14.88

-0.53

0.30

P36125

PAGPQGQRR

12.22

-1.00

-0.17

NDLPAGPQG

15.17

-0.06

0.77

P53142

PLIEPTTTN

16.36

-0.71

0.13

P36123

RPGNPLYTT

14.34

-0.18

0.66

YARPGNPLY

15.29

-1.56

-0.73

FPPDHFPSR

17.02

-2.22

-1.39

Q08412

DVPPQLPTR

15.44

-2.71

-1.88

LPPEPLDTT

15.94

0.31

1.15

IELPTQPVR

17.16

-3.38

-2.54

P32793

PTHPSNMSN

16.22

-0.93

-0.10

Q06409

PRKTPRPPF

15.00

-1.44

-0.60

GKPRKTPRP

16.69

-2.41

-1.58

TPRPPFPFF

16.74

-2.37

-1.54

P32634

VPTEPTRYN

13.44

-2.25

-1.42

PTEPTRYNY

13.45

-1.59

-0.76

PPVPKAPSR

15.61

-1.97

-1.14

Q06833

RPVPRRPSQ

14.30

-4.42

-3.59

PRRPSQPLN

15.82

-1.62

-0.79

VPRRPSQPL

15.94

-2.17

-1.34

P50101

PGSPIDKSI

15.25

-1.23

-0.40

P53118

ENPHDLPSH

15.68

-2.05

-1.21

Q12199

PNNPQCLHC

15.16

-2.97

-2.14

NPNNPQCLH

15.88

-0.68

0.15

P19158

PVSPLGLDT

14.99

3.38

4.21

SMTPVSPLG

16.57

-2.71

-1.88

PSLPDTPTM

16.97

-0.52

0.31

P43638

PKLPSAFRK

12.43

-1.98

-1.15

PTDAPGFDK

15.98

2.13

2.96

AKGRPIPPH

16.57

-1.68

-0.84

P53933

NDLPMELPH

16.32

-0.52

0.31

VAPPPLPNR

16.91

-2.13

-1.29

PPPIPSTQK

17.11

-0.35

0.48

P32790

APLDPFKTG

13.68

-0.75

0.08

KPPRPTSTT

14.01

-0.27

0.56

PPRPTSTTS

15.88

-0.86

-0.03

P40020

PPLTPEKNL

13.42

-1.31

-0.48

EPTSPTRQV

14.61

-0.01

0.82

PLTPEKNLY

15.02

-3.63

-2.79

P00175

LPNHPGGQD

15.67

-1.03

-0.20

PNHPGGQDV

16.89

1.38

2.21

Q08229

PVQPGGHYK

11.64

-1.22

-0.39

TPVQPGGHY

14.32

-3.32

-2.48

RPLPSTPNE

16.84

-2.46

-1.63

P40528

IPITPSHDN

16.33

-0.69

0.15

NDIPITPSH

16.99

-0.03

0.80

Q12446

PPPPPHRHV

12.95

-3.99

-3.16

PPPPPMRTT

13.41

-2.39

-1.56

LPDPPQHNS

13.55

-4.02

-3.18

Q12211

KRPKSGPRL

9.76

-2.28

-1.44

Q06116

PNSPELVPR

17.45

0.07

0.91

P33336

LPSHPSSNN

17.21

-1.00

-0.17

P38090

SPNDPDLTA

16.21

0.60

1.44

Q06266

FPSSPYRTV

13.12

-1.50

-0.67

SPAFPGQLA

14.47

-0.18

0.66

SQFPSSPYR

17.23

-1.48

-0.65

Q00916

PRPPLSYKR

11.87

-1.84

-1.01

KRPTDYPYA

12.85

-0.95

-0.11

YKRPTDYPY

13.95

-0.72

0.11

P07269

LPNTPDFLK

11.71

-1.85

-1.02

SELPNTPDF

17.57

-0.61

0.22

PNTPDFLKN

17.59

-1.69

-0.85

P40563

PSERPKRRA

11.83

-1.38

-0.54

PPTPAGTPN

17.29

-1.51

-0.68

P10566

RPIPAIPMD

16.11

-1.06

-0.23

AIPMDLPDY

16.38

-0.79

0.04

P38289

PENPSFINY

14.45

-1.59

-0.76

DVPTNDPSG

15.87

0.51

1.35

P47030

FPPEPSMSS

12.42

-0.46

0.37

P53901

PPLPPIPTR

15.53

-3.09

-2.25

PKLPPLPTT

15.79

1.86

2.70

RPIPPLPTE

16.20

-1.13

-0.29

P32862

VPSTPSRSN

13.99

-0.82

0.02

PGSTPQRST

15.00

2.10

2.94

NTVPSTPSR

17.49

-1.53

-0.70

P31374

SPERPSFRQ

12.90

-0.87

-0.04

FEQPRLPST

13.41

-2.93

-2.10

NISPERPSF

13.98

-3.65

-2.81

 


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