ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_2A08-9.PDB
Scoring matrix: LSB3_2A08-9_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 16.88
Foldx random average score for Saccharomyces cerevisiae: 13.694

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1434915
Proteins after disorder filtering: 4573
 Total fragments: 64425
Proteins after pattern filtering: 2005
 Total fragments: 7703
Proteins after MINT filtering: 68
 Total fragments: 482


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

16.88

-3.60

0.00
Best peptides

RPYKVFRR

0.00

-12.08

-8.48
         
Interactors      
P38140

QPDLPPRK

11.59

-10.90

-7.30

MNIQPDLP

12.81

-5.53

-1.93

IQPDLPPR

13.02

-6.88

-3.28
Q06604

KGPRMPSR

9.09

-7.98

-4.38

PPPLPTRR

9.90

-12.96

-9.36

KPLLPTRP

10.63

-10.39

-6.79
P09119

QVPLTPTT

12.64

-5.96

-2.36

TPTTSPVK

13.24

-4.81

-1.21
P24814

LHPPDIHP

13.47

-4.63

-1.03

NSTRPQMP

13.54

-6.46

-2.86

HPNLGPQL

13.57

-5.64

-2.04
P25604

PKPKSPHL

10.99

-5.37

-1.77

LPPKPKSP

12.09

-7.77

-4.17

KPKSPHLK

12.23

-6.48

-2.88
P40956

NPKNVPFP

9.42

-7.43

-3.83

TPPLPRRR

9.95

-12.83

-9.23

WNPKNVPF

10.15

-5.61

-2.01
P25623

LPKTVPIS

9.14

-7.71

-4.11

NLPKTVPI

10.89

-5.21

-1.61

KPLPVEPA

11.11

-6.46

-2.86
Q04322

PPTLPPRR

9.45

-12.94

-9.34

TPPTLPPR

12.11

-8.86

-5.26

TPSKSPTS

12.29

-5.34

-1.74
P38266

PPPKPFRR

7.04

-11.69

-8.09

MPPPKPFR

7.23

-9.65

-6.05

KPPVVPKK

7.39

-9.57

-5.97
P47043

KNKPNPPP

12.00

-4.71

-1.11

KPPQLPPK

12.48

-6.59

-2.99

KKNKPNPP

12.77

-5.72

-2.12
P15891

APPPPPRR

9.53

-12.39

-8.79

RATPEKKP

9.90

-3.91

-0.31

EPVKTPSP

10.12

-6.67

-3.07
P40341

KPPLNDPS

10.64

-6.49

-2.89

PPPKPPLN

11.41

-8.32

-4.72

NDPSNPVS

12.63

-3.96

-0.36
Q12134

QPVPSPMN

12.19

-6.14

-2.54
P40494

RPPPKPLH

7.80

-7.97

-4.37

RPPRPPPK

9.53

-8.28

-4.68

DKSRPPRP

10.52

-8.42

-4.82
Q12200

LPCPVPRS

8.64

-10.83

-7.23

PPSFPSRR

9.52

-11.83

-8.23

CPPSFPSR

10.44

-2.33

1.27
Q12344

SPPLPPRQ

12.67

-10.82

-7.22

TSPKLPPR

12.83

-6.97

-3.37

SPKLPPRG

13.04

-9.87

-6.27
P53189

LQPSTIPQ

13.27

-3.54

0.06
P53238

KPAGRPIP

11.16

-5.79

-2.19

PPAPTHYN

12.34

-5.74

-2.14

RPIPPAPT

12.68

-5.48

-1.88
P32660

YDPTDPNR

8.59

-7.59

-3.99

HAPMSPFE

11.66

-4.41

-0.81

DPTDPNRP

12.77

-7.86

-4.26
P33400

PPLPVGIS

11.69

-7.50

-3.90

QPPNAPSY

12.10

-6.41

-2.81

VQPPNAPS

13.60

-4.38

-0.78
P53901

LPPIPTRD

11.21

-12.15

-8.55

MRPIPPLP

11.83

-8.28

-4.68

RPIPPLPT

12.27

-5.34

-1.74
P38739

SPFHDPIL

11.50

-6.52

-2.92
Q04749

NPVFNPRK

8.18

-9.48

-5.88

PLPVLPRR

9.49

-11.19

-7.59

SPLPVLPR

10.24

-9.01

-5.41
P04051

RSLPHFPK

12.86

-2.74

0.86

SLPHFPKN

13.41

-0.12

3.48

VNPAMLPG

13.54

-4.85

-1.25
P40325

RPSTMPAT

8.65

-6.22

-2.62

RPQQNPSL

8.75

-5.20

-1.60

QPPRPPRP

9.13

-11.60

-8.00
P47129

LPNRKPNP

10.12

-7.28

-3.68

KPNPPPNR

11.78

-7.62

-4.02

PPLLPPRN

12.21

-11.03

-7.43
P40453

KPPDLPIR

9.99

-8.65

-5.05

PPPPVSMP

10.47

-9.46

-5.86

EPPSWKPP

11.71

-2.50

1.10
P40095

PPPRSPNR

8.77

-9.06

-5.46

IPVLPPPR

11.57

-9.62

-6.02

RSPNRPTL

11.74

-3.06

0.54
Q12168

IPPPVPNR

8.67

-10.68

-7.08

DPYFPQFR

10.08

-7.83

-4.23

PPPVPNRP

11.25

-10.50

-6.90
P36125

PAGPQGQR

13.50

-4.94

-1.34
P40528

DIPITPSH

13.00

-5.33

-1.73

IPITPSHD

13.62

-5.46

-1.86
P36123

RPGNPLYT

10.93

-4.74

-1.14

ARPGNPLY

10.99

-6.53

-2.93

PPDHFPSR

11.25

-2.03

1.57
Q08412

ELPTQPVR

10.75

-7.47

-3.87

LPTQPVRK

10.97

-9.55

-5.95

VPPQLPTR

11.54

-7.59

-3.99
P32855

NAPTLPKR

11.38

-6.09

-2.49

APTLPKRK

12.15

-9.75

-6.15

NPSSSPNS

13.35

-3.26

0.34
Q06409

KPRKTPRP

5.47

-10.81

-7.21

GKPRKTPR

10.36

-7.08

-3.48

RKTPRPPF

10.72

-5.87

-2.27
P32634

KIPLEPLP

9.49

-6.62

-3.02

PVPKAPSR

9.79

-8.72

-5.12

TVPTEPTR

9.92

-6.06

-2.46
Q06833

RRPVPRRP

8.99

-11.25

-7.65

RRPSQPLN

10.58

-5.46

-1.86

RPVPRRPS

11.06

-5.06

-1.46
P53118

ENPHDLPS

13.19

-3.69

-0.09
Q12199

APATPPRH

10.90

-9.98

-6.38

AAPATPPR

11.90

-6.78

-3.18

NNPNNPQC

12.31

-2.91

0.69
P19158

MTPVSPLG

12.29

-4.68

-1.08

LPDTPTMS

12.93

-7.74

-4.14
P38870

TPERPKRK

11.27

-8.89

-5.29

TPTTPERP

12.05

-9.57

-5.97

STPTTPER

12.90

-4.77

-1.17
P43638

PKLPSAFR

10.45

-5.62

-2.02

IPPTDAPG

11.19

-5.56

-1.96

SPTTDPIS

11.72

-4.81

-1.21
P53933

RPPPPPIP

10.46

-7.21

-3.61

RVAPPPLP

10.62

-6.74

-3.14

DLPMELPH

10.92

-4.59

-0.99
P32790

LPPIKPPR

8.07

-9.96

-6.36

PPIKPPRP

9.56

-9.77

-6.17

PPPAMPAR

10.05

-9.60

-6.00
P40020

PPLPFPLY

10.48

-2.15

1.45

EEPTSPTR

10.58

-7.06

-3.46

PPYLSPQN

11.83

-5.48

-1.88
P38238

QSPTNPPY

10.93

-4.93

-1.33

DPVQSPTN

13.21

-4.02

-0.42

LDPVQSPT

13.27

-5.12

-1.52
P00175

RFLPNHPG

11.33

-3.98

-0.38
Q08229

NPTIPPRS

11.11

-10.56

-6.96

RPLPSTPN

11.55

-4.35

-0.75

LPTPVQPG

12.30

-6.37

-2.77
P38930

FPDMVPKH

7.11

-10.20

-6.60
Q12446

APPPPPRR

9.53

-12.39

-8.79

FPFPVPQQ

9.72

-8.09

-4.49

QPQSNPFP

9.91

-5.94

-2.34
Q12211

RPKSGPRL

8.28

-8.98

-5.38

KRPKSGPR

8.50

-7.87

-4.27

NPLPKEPR

10.59

-7.17

-3.57
Q06116

SPELVPRS

9.72

-10.83

-7.23

SEPVEPFS

11.91

-5.72

-2.12

KPFYPVTS

13.62

-4.79

-1.19
P33336

RNLPSHPS

12.53

-2.78

0.82
P40041

KIPLSPPS

12.79

-5.35

-1.75
P50942

RPCPPIRR

7.32

-11.75

-8.15

PPPPTSRH

10.02

-10.73

-7.13

KPEKPPVV

11.76

-7.97

-4.37
Q06266

QFPSSPYR

10.02

-5.97

-2.37

FPSSPYRT

11.10

-9.45

-5.85

GDYPTPFP

11.34

-4.68

-1.08
Q00916

KRPTDYPY

9.94

-4.70

-1.10

RLFKPRPP

10.16

-6.84

-3.24

FKPRPPLS

10.68

-7.09

-3.49
P07269

LPNTPDFL

12.01

-6.40

-2.80

SGPQRPKR

12.08

-4.37

-0.77

PNTPDFLK

12.57

-5.34

-1.74
P40563

VTPKVPER

9.87

-7.89

-4.29

PSERPKRR

10.03

-11.43

-7.83

APPPVPKK

10.18

-9.39

-5.79
P10566

RPIPAIPM

10.34

-5.67

-2.07

AIPMDLPD

12.43

-5.02

-1.42

PAIPMDLP

12.63

-5.25

-1.65
P38289

DVPTNDPS

12.05

-3.87

-0.27

VPTNDPSG

13.21

-4.78

-1.18

DPENPSFI

13.57

-5.95

-2.35
P47030

AFPPEPSM

13.26

-3.33

0.27
P32863

LPDRPPNG

12.94

-7.18

-3.58
P32862

SPGSTPQR

10.31

-6.63

-3.03

TVPSTPSR

11.48

-4.43

-0.83

VPSTPSRS

11.59

-9.22

-5.62
P39743

NPLTSPVA

12.30

-4.21

-0.61
P31374

SPERPSFR

10.27

-9.18

-5.58

RKTKPPPP

10.31

-7.39

-3.79

EPTPDDLP

10.84

-6.69

-3.09
P53169

MPTLPPRP

10.22

-11.34

-7.74

IMPTLPPR

11.40

-8.05

-4.45

VPIMPTLP

11.70

-8.09

-4.49
P53955

RNPIPYPI

11.97

-6.23

-2.63

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                      DISCLAIMER