ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-23.PDB
Scoring matrix: LSB3_1SSH-23_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 14.48
Foldx random average score for Saccharomyces cerevisiae: 11.354

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1348000
Proteins after disorder filtering: 4692
 Total fragments: 57449
Proteins after pattern filtering: 1851
 Total fragments: 5514
Proteins after MINT filtering: 64
 Total fragments: 290


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

14.48

-1.84

0.00

Best peptides

RRMRRWF

0.00

-9.41

-7.57

         
Interactors      
P38140

QPDLPPR

8.92

-4.55

-2.71

IPPHPYP

10.77

-3.71

-1.87

Q06604

LPTRPNK

7.31

-4.60

-2.76

KPLLPTR

8.48

-7.81

-5.97

KGPRMPS

8.89

-5.04

-3.20

P09119

QVPLTPT

10.39

-3.33

-1.49

VPLTPTT

10.61

-4.55

-2.71

LTPTTSP

11.27

-4.07

-2.23

P24814

HPNLGPQ

9.54

-4.33

-2.49

HPPDIHP

10.52

-2.98

-1.14

PNLGPQL

10.84

-4.89

-3.05

P25604

PHLKPPL

7.57

-6.77

-4.93

LPPKPKS

8.31

-4.51

-2.67

LPPKPNT

8.69

-4.38

-2.54

P40956

WNPKNVP

9.31

-4.64

-2.80

TPPLPRR

10.12

-4.28

-2.44

NPKNVPF

10.42

-3.37

-1.53

P25623

PPLQPQS

9.53

-5.54

-3.70

QPPLQPQ

9.69

-3.79

-1.95

LPKTVPI

10.27

-3.96

-2.12

Q04322

PLDRPQL

7.95

-3.88

-2.04

QAPLDRP

8.85

-4.79

-2.95

TPSKSPT

10.59

-2.97

-1.13

P38266

YPIEPSL

8.03

-4.97

-3.13

TPPRPPP

8.18

-4.72

-2.88

MQPQPPQ

8.30

-4.42

-2.58

P47043

KPPQLPP

9.43

-5.43

-3.59

PPQLPPK

9.57

-5.73

-3.89

NKPNPPP

10.71

-2.83

-0.99

P15891

QPPLPSR

9.79

-3.71

-1.87

PEKKPKE

9.84

-2.80

-0.96

TPEKKPK

10.61

-3.28

-1.44

P40341

PPPKPPL

9.09

-3.40

-1.56

KPPLNDP

9.81

-5.79

-3.95

PPLNDPS

10.66

-4.83

-2.99

P40494

RPPRPPP

3.61

-8.37

-6.53

PNMMPVT

9.19

-6.73

-4.89

PPPKPLH

9.30

-3.28

-1.44

Q12200

PHLKPLK

7.60

-7.32

-5.48

CPHLKPL

9.08

-3.87

-2.03

Q12344

TSPKLPP

10.61

-4.20

-2.36

SPPLPPR

11.25

-4.19

-2.35

P53189

LQPSTIP

10.42

-3.70

-1.86

QPSTIPQ

11.28

-1.63

0.21

P53238

PAGRPIP

8.55

-4.36

-2.52

QKPAGRP

9.95

-3.62

-1.78

P32660

HAPMSPF

7.75

-4.48

-2.64

DPNRPKV

8.65

-2.52

-0.68

YPPGYDP

8.99

-4.50

-2.66

P33400

LPPLPVG

9.63

-5.50

-3.66

PQILPPL

9.92

-4.43

-2.59

TSPQILP

10.41

-3.91

-2.07

P53901

QPPLPPI

8.54

-4.22

-2.38

LPPLPTT

9.12

-4.72

-2.88

MRPIPPL

9.66

-5.98

-4.14

P38739

SPFHDPI

11.13

-1.76

0.08

Q04749

LPVLPRR

7.88

-4.59

-2.75

FNPRKPT

8.13

-5.81

-3.97

NPRKPTL

9.72

-3.26

-1.42

P04051

PAMLPGS

9.72

-6.94

-5.10

LPHFPKN

10.56

-3.46

-1.62

VNPAMLP

10.61

-4.06

-2.22

P40325

RPPRPAA

4.93

-6.64

-4.80

RPQQNPS

6.79

-7.54

-5.70

RPHQRPS

7.11

-6.59

-4.75

P47129

LPNRKPN

6.92

-4.54

-2.70

RKPNPPP

7.08

-5.75

-3.91

PPLLPPR

8.50

-6.73

-4.89

P40453

PPSWKPP

8.41

-2.42

-0.58

PPDLPIR

9.47

-5.76

-3.92

MPTTPEI

9.71

-4.24

-2.40

P40095

RSPNRPT

7.96

-6.51

-4.67

PPPRSPN

8.90

-3.06

-1.22

SPNRPTL

9.24

-3.18

-1.34

Q12168

VPNRPGG

8.97

-3.72

-1.88

PPPLPPR

10.32

-3.45

-1.61

PVPKPNI

10.33

-2.89

-1.05

P40528

PLPYPIA

10.99

-2.37

-0.53

P36123

RPGNPLY

7.25

-7.48

-5.64

TPPRPKT

8.61

-3.21

-1.37

QPSDPKL

10.40

-1.71

0.13

Q08412

WQPLPPE

8.54

-4.61

-2.77

LPPEPLD

9.72

-3.83

-1.99

LPTQPVR

9.86

-3.82

-1.98

Q06697

GGPRKDP

9.77

-3.53

-1.69

GPRKDPI

11.15

-2.85

-1.01

Q06409

RPPFPFF

6.28

-8.71

-6.87

KTPRPPF

6.82

-5.00

-3.16

GKPRKTP

9.71

-3.82

-1.98

P32634

YPLNLPI

5.79

-7.62

-5.78

LEPLPPV

8.52

-4.48

-2.64

IPLEPLP

9.04

-6.38

-4.54

Q06833

RPSQPLN

5.57

-6.30

-4.46

RRPSQPL

7.73

-7.15

-5.31

VPRRPSQ

8.25

-3.34

-1.50

P53118

PHDLPSH

10.46

-5.29

-3.45

P53955

NDPRSPL

7.66

-3.51

-1.67

RNPIPYP

8.81

-7.63

-5.79

PIPYPID

10.88

-2.35

-0.51

P19158

YDPSLPD

9.35

-4.83

-2.99

LPDTPTM

9.76

-4.35

-2.51

DPSLPDT

10.78

-2.25

-0.41

P38870

TPERPKR

8.89

-3.38

-1.54

STPKPPP

10.92

-3.79

-1.95

P43638

HPDAPKL

8.59

-4.89

-3.05

PTDAPGF

10.77

-3.39

-1.55

RPIPPHP

11.29

-6.97

-5.13

P53933

LPMELPH

8.90

-6.01

-4.17

DLPMELP

9.70

-3.82

-1.98

YPGNPTS

9.99

-5.10

-3.26

P32790

MPARPTA

7.24

-4.25

-2.41

KPPRPTS

8.67

-5.24

-3.40

PAPLDPF

9.72

-3.05

-1.21

P40020

LPPLPFP

7.43

-6.11

-4.27

LPPYLSP

8.85

-4.03

-2.19

RVLPPLP

10.12

-6.27

-4.43

P00175

RFLPNHP

10.46

-9.38

-7.54

CPPYAPG

10.85

-2.63

-0.79

LPNHPGG

11.11

-3.60

-1.76

Q08229

YNPTIPP

9.13

-6.05

-4.21

LPSTPNE

10.29

-2.90

-1.06

RPLPSTP

11.33

-7.28

-5.44

P38930

FPDMVPK

8.49

-6.72

-4.88

MVPKHPT

9.44

-3.77

-1.93

Q12446

RLPAPPP

7.31

-7.88

-6.04

RGPAPPP

7.31

-6.43

-4.59

PPPRRGP

8.18

-4.09

-2.25

Q12211

RPKSGPR

9.02

-6.63

-4.79

KRPKSGP

9.48

-5.51

-3.67

PKSGPRL

10.63

-3.18

-1.34

Q06116

KPFYPVT

9.42

-3.63

-1.79

P33336

LPSHPSS

10.31

-2.21

-0.37

RNLPSHP

10.55

-8.10

-6.26

P40041

KIPLSPP

9.84

-5.61

-3.77

IPLSPPS

10.76

-4.39

-2.55

P50942

HPLKPCD

7.37

-5.91

-4.07

IVPRPCP

8.69

-4.52

-2.68

KPEKPPV

9.39

-4.17

-2.33

Q06266

VDPYSPP

10.09

-2.91

-1.07

FPSSPYR

10.75

-4.00

-2.16

IPSSPAF

10.96

-2.31

-0.47

Q00916

FKPRPPL

6.66

-6.39

-4.55

RPTDYPY

9.11

-4.40

-2.56

PTDYPYA

10.66

-3.38

-1.54

P07269

GPQRPKR

8.78

-3.60

-1.76

LPNTPDF

9.67

-3.36

-1.52

P40563

PSERPKR

8.78

-3.87

-2.03

VTPKVPE

10.03

-3.65

-1.81

NPGQLPP

10.57

-3.04

-1.20

P10566

PMDLPDY

10.10

-4.57

-2.73

AIPMDLP

10.29

-4.70

-2.86

IPMDLPD

11.35

-4.81

-2.97

P38289

DPENPSF

11.29

-1.51

0.33

P47030

NNPLDKP

10.05

-5.50

-3.66

FPPEPSM

10.78

-4.71

-2.87

P32863

LPDRPPN

6.18

-4.52

-2.68

P32862

RPPNPPA

7.81

-6.95

-5.11

QPQLPPP

8.19

-4.94

-3.10

MNPSNSP

10.54

-4.42

-2.58

P39743

NPLTSPV

10.34

-4.80

-2.96

P31374

SPERPSF

8.45

-2.88

-1.04

PDDLPPL

9.17

-4.55

-2.71

EQPRLPS

9.96

-3.06

-1.22

P53169

MPTLPPR

8.22

-5.37

-3.53

VPIMPTL

8.81

-5.33

-3.49

YSPAQPS

9.23

-5.71

-3.87

 


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