ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-21.PDB
Scoring matrix: LSB3_1SSH-21_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 18.51
Foldx random average score for Saccharomyces cerevisiae: 15.168

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1810683
Proteins after disorder filtering: 4296
 Total fragments: 59132
Proteins after pattern filtering: 1544
 Total fragments: 3550
Proteins after MINT filtering: 59
 Total fragments: 173


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

18.51

-0.92

0.00
Best peptides

RWIMGIPTWR

0.00

-4.61

-3.69
         
Interactors      
P38140

IQPDLPPRKI

14.78

-3.64

-2.72
Q06604

RVKPAPPVSR

11.53

-3.53

-2.61

PLLPTRPNKA

11.63

-3.67

-2.75

PTPPSPPAKR

13.31

-4.95

-4.03
P09119

LTPTTSPVKK

11.69

-3.61

-2.69

AQVPLTPTTS

12.19

-1.91

-0.99

TPTTSPVKKS

14.04

-3.99

-3.07
P24814

HPNLGPQLWL

10.21

-4.45

-3.53

IHPNLGPQLW

13.56

-2.31

-1.39

HPPDIHPNLG

13.86

-2.56

-1.64
P25604

PPKPKSPHLK

9.84

-5.53

-4.61

SLPPKPNTQL

10.69

-3.95

-3.03
P40956

PPLPRRRATT

15.10

-1.92

-1.00
P25623

NLPKTVPISI

12.81

-4.18

-3.26

LPPHATPKNV

13.23

-1.84

-0.92

EVPPSTPQQS

14.10

-2.88

-1.96
P50942

VPRPCPPIRR

10.44

-4.38

-3.46

PPPPTSRHNK

13.50

-3.51

-2.59
Q04322

ATPSKSPTSA

13.68

-1.44

-0.52

TPPTLPPRRI

14.21

-4.26

-3.34
P38266

PLKPGQKTYT

8.91

-4.05

-3.13

KKPPVVPKKK

9.64

-5.39

-4.47

KVPPVVPKKN

11.65

-3.38

-2.46
P47043

ASDPTSPQQN

14.10

-2.42

-1.50

KPPQLPPKCS

14.39

-3.59

-2.67
P15891

ATPEKKPKEN

12.64

-4.15

-3.23

DEPEGEPDVK

13.69

-0.96

-0.04
P40341

LNDPSNPVSK

13.22

-2.63

-1.71
P40494

QPPNMMPVTH

11.55

-2.17

-1.25

PPNMMPVTHV

12.67

-5.40

-4.48
Q12200

VCPPSFPSRR

12.21

-3.54

-2.62
Q12344

PLPPRQNVAT

13.38

-4.01

-3.09
P53238

PIPPAPTHYN

13.29

-4.28

-3.36
P32660

PMSPFEDTFQ

9.92

-3.01

-2.09

PTDPNRPKVT

12.01

-2.86

-1.94

TDPNRPKVTK

14.59

-2.66

-1.74
P38739

SPPNDPSTLA

13.57

-3.22

-2.30
Q04749

VFNPRKPTLS

8.91

-2.81

-1.89

PRKPTLSTDS

12.71

-2.41

-1.49

SPLPVLPRRI

12.90

-4.23

-3.31
P04051

RSLPHFPKNS

11.92

-2.69

-1.77

SLPHFPKNSK

13.44

-2.90

-1.98
P40325

YVQPGDPRLG

11.64

-4.05

-3.13

LPWTYPPRFY

13.42

-3.33

-2.41

SRPHQRPSTM

13.52

-2.51

-1.59
P47129

GPPLLPPRNT

14.37

-3.54

-2.62

PLLPPRNTMK

14.50

-4.50

-3.58
P40453

WKPPDLPIRL

11.20

-5.65

-4.73

PDLPIRLRKR

11.78

-4.22

-3.30

TKVPEPPSWK

11.87

-4.61

-3.69
P40095

PRSPNRPTLS

9.47

-4.04

-3.12
Q12168

PNRPGGTTNR

8.11

-3.53

-2.61

NDDPYFPQFR

9.97

-3.28

-2.36
P36125

PAGPQGQRRR

11.97

-5.15

-4.23

DLPAGPQGQR

13.71

-3.50

-2.58
P32793

HGPTHPSNMS

13.82

-3.75

-2.83
P36123

RSQPSDPKLQ

10.56

-3.34

-2.42

YARPGNPLYT

13.76

-3.75

-2.83
Q08412

DVPPQLPTRT

10.33

-3.60

-2.68

IELPTQPVRK

12.17

-3.36

-2.44

ELPTQPVRKN

14.26

-4.84

-3.92
P32855

NNAPTLPKRK

10.34

-3.83

-2.91

SNPSSSPNSL

14.74

-1.84

-0.92
Q06409

NNFPTVPVVE

13.59

-2.21

-1.29

SHSPFSPFNS

14.85

-2.03

-1.11
P32634

ETVPTEPTRY

10.48

-2.88

-1.96

PNSPILPVLN

12.70

-4.04

-3.12

DVPDSGPVSR

12.76

-3.47

-2.55
Q06833

RRPSQPLNTL

12.91

-2.84

-1.92

PRRPSQPLNT

13.25

-3.74

-2.82

PVPPSASNMN

13.80

-3.85

-2.93
P53118

NPHDLPSHLG

14.70

-3.20

-2.28
Q12199

NNPNNPQCLH

11.15

-4.19

-3.27

CNNPNNPQCL

13.21

-2.82

-1.90

PNNPQCLHCG

14.23

-3.22

-2.30
P19158

PSLPDTPTMS

11.42

-4.10

-3.18

SMTPVSPLGL

14.96

-4.49

-3.57
P43638

DAPKLPSAFR

14.28

-4.41

-3.49

ASPTTDPIST

15.16

-2.26

-1.34
P53933

VSYPGNPTSR

8.35

-1.99

-1.07

PPPPIPSTQK

13.03

-3.65

-2.73
P50101

TVFPGSPIDK

12.76

-3.17

-2.25
P40020

SEEPTSPTRQ

11.00

-4.28

-3.36

YLTPESPLNR

11.16

-5.12

-4.20

TSAPSIPVEH

12.42

-2.06

-1.14
P00175

PNHPGGQDVI

14.78

-0.90

0.02
Q08229

PVQPGGHYKN

13.39

-3.30

-2.38

YNPTIPPRSK

14.91

-2.78

-1.86

RPLPSTPNED

15.12

-1.48

-0.56
P40528

DIPITPSHDN

13.93

-3.32

-2.40
Q12446

PIPEIPSTQS

11.88

-4.34

-3.42

RPLPQLPNRN

12.11

-4.00

-3.08

ALPPASPEVR

12.17

-3.10

-2.18
Q12211

KRPKSGPRLD

12.13

-5.10

-4.18
Q06116

GVKPFYPVTS

13.22

-3.06

-2.14

VKPFYPVTSE

14.00

-2.72

-1.80

PFYPVTSEFS

14.80

-2.09

-1.17
P33336

PSHPSSNNMS

14.72

-3.52

-2.60
P38090

VCSPNDPDLT

13.40

-1.11

-0.19
Q06266

SQFPSSPYRT

13.18

-4.23

-3.31

VDPYSPPNYK

14.15

-2.90

-1.98
Q00916

KRPTDYPYAK

13.64

-4.44

-3.52

RPTDYPYAKR

13.65

-4.92

-4.00

LFKPRPPLSY

15.09

-3.35

-2.43
P07269

ELPNTPDFLK

12.62

-4.11

-3.19

NAPDEDPNLN

13.92

-3.56

-2.64

SELPNTPDFL

13.97

-1.02

-0.10
P10566

RPIPAIPMDL

14.14

-2.73

-1.81
P38289

PENPSFINYR

12.76

-3.26

-2.34

EDPENPSFIN

15.01

-2.46

-1.54
P32790

APAPLDPFKT

13.15

-3.01

-2.09

PPRPTSTTSV

13.29

-2.65

-1.73

PAPLDPFKTG

14.54

-3.07

-2.15
P53901

DPIILPPTFS

10.57

-4.98

-4.06

KLPPLPTTSN

12.70

-3.83

-2.91
P32862

NPPANNPTVQ

12.78

-2.29

-1.37

MNPSNSPNSM

14.67

-0.94

-0.02

NTVPSTPSRS

15.13

-2.78

-1.86
P31374

NISPERPSFR

10.31

-4.21

-3.29

VFPNLDPTHS

12.07

-3.84

-2.92

FPNLDPTHSQ

12.99

-3.68

-2.76
P38870

PTTPERPKRK

10.41

-5.02

-4.10

TTPERPKRKS

13.97

-4.32

-3.40

 


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