ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-11.PDB
Scoring matrix: LSB3_1SSH-11_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 15.11
Foldx random average score for Saccharomyces cerevisiae: 11.847

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3221900
Proteins after random average filtering: 7179
 Total fragments: 1488217
Proteins after disorder filtering: 4629
 Total fragments: 68020
Proteins after pattern filtering: 2039
 Total fragments: 8898
Proteins after MINT filtering: 68
 Total fragments: 578


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

15.11

-2.12

0.00
Best peptides

FDWLIPR

0.00

-7.75

-5.63
         
Interactors      
P38140

QPDLPPR

4.39

-8.78

-6.66

PDLPPRK

9.31

-5.41

-3.29

NIPPHPY

10.37

-4.19

-2.07
Q06604

PPPLPTR

4.07

-10.87

-8.75

KPLLPTR

4.23

-8.39

-6.27

GPRMPSR

4.98

-8.48

-6.36
P24814

PDIHPNL

10.32

-4.93

-2.81

TRPQMPS

10.56

-3.64

-1.52

HPPDIHP

10.82

-3.91

-1.79
P25604

TPPLPPK

7.13

-5.99

-3.87

APSLPPK

7.71

-6.43

-4.31

PLPPKPK

7.88

-5.17

-3.05
P40956

TPPLPRR

3.81

-7.90

-5.78

PPLPRRR

5.08

-8.54

-6.42

STPPLPR

5.97

-5.87

-3.75
P25623

TPPLPPH

7.84

-5.86

-3.74

PPHATPK

9.37

-5.14

-3.02

QPPLQPQ

9.79

-4.78

-2.66
Q04322

SPPLPPR

3.75

-9.23

-7.11

PPTLPPR

4.03

-9.39

-7.27

PTLPPRR

8.14

-8.14

-6.02
P38266

VPILPPR

4.03

-7.64

-5.52

PPPKPFR

4.23

-8.57

-6.45

MPPPKPF

5.52

-7.06

-4.94
P47043

PPQLPPK

7.69

-7.05

-4.93

KPPQLPP

8.67

-5.32

-3.20

NKPNPPP

11.23

-2.75

-0.63
P15891

QPPLPSR

4.20

-9.62

-7.50

PPPPPRR

5.60

-9.73

-7.61

APPPPPR

5.63

-8.85

-6.73
P40341

PPPKPPL

8.81

-7.04

-4.92

PPPPPPK

8.93

-7.20

-5.08

PPPPKPP

9.53

-5.48

-3.36
P40494

RPPPKPL

8.05

-5.02

-2.90

PPPKPLH

8.45

-7.17

-5.05

PPRPPPK

8.99

-6.40

-4.28
Q12200

PPSFPSR

4.40

-9.04

-6.92

LPCPVPR

5.13

-7.95

-5.83

CPHLKPL

7.17

-4.57

-2.45
Q12344

SPPLPPR

3.75

-9.23

-7.11

SPKLPPR

3.94

-8.38

-6.26

TSPKLPP

9.52

-3.02

-0.90
P53189

QPSTIPQ

9.79

-5.53

-3.41
P53238

IPPAPTH

10.05

-4.93

-2.81

PPAPTHY

10.15

-6.26

-4.14

KPAGRPI

10.88

-2.88

-0.76
P32660

DPTDPNR

7.64

-6.87

-4.75

TDPNRPK

7.94

-2.18

-0.06

HAPMSPF

9.86

-4.21

-2.09
P33400

SPQILPP

9.22

-4.14

-2.02

ILPPLPV

9.69

-3.38

-1.26

PQILPPL

10.30

-5.80

-3.68
P53901

LPPIPTR

4.89

-9.26

-7.14

NDPIILP

7.86

-5.56

-3.44

MRPIPPL

8.21

-5.36

-3.24
P38739

HDPILPR

2.62

-8.69

-6.57

FHDPILP

10.14

-4.42

-2.30
Q04749

NPVFNPR

3.63

-7.90

-5.78

PLPVLPR

4.02

-8.03

-5.91

LPVLPRR

4.18

-8.40

-6.28
P04051

NPAMLPG

8.52

-5.80

-3.68

LPHFPKN

10.72

-5.77

-3.65

PAMLPGS

11.82

-4.27

-2.15
P40325

QPPRPPR

4.58

-8.22

-6.10

PWTYPPR

5.88

-7.94

-5.82

QPRPPPR

5.99

-8.54

-6.42
P47129

PPLLPPR

4.07

-9.77

-7.65

PNPPPNR

6.73

-6.59

-4.47

GPPLLPP

8.68

-6.17

-4.05
P40453

PPDLPIR

4.31

-8.58

-6.46

PPPLPPK

7.08

-7.84

-5.72

PDLPIRL

8.86

-5.75

-3.63
P40095

PPRSPNR

6.48

-8.32

-6.20

PVLPPPR

7.40

-8.45

-6.33

RIPVLPP

9.25

-4.64

-2.52
Q12168

PPPLPPR

3.61

-10.42

-8.30

PPPVPNR

5.39

-9.72

-7.60

PYFPQFR

7.27

-6.14

-4.02
P36125

NDLPAGP

11.47

-3.27

-1.15
P40528

NDIPITP

9.28

-4.42

-2.30

IPITPSH

9.42

-4.38

-2.26

PLPYPIA

11.57

-4.44

-2.32
P36123

PDHFPSR

3.98

-7.96

-5.84

TPKTPPR

5.60

-6.56

-4.44

PPRPKTI

9.55

-6.06

-3.94
Q08412

PPQLPTR

4.68

-9.17

-7.05

LPTQPVR

5.76

-7.56

-5.44

VPPQLPT

9.95

-3.90

-1.78
Q06697

GGPRKDP

11.24

-4.04

-1.92
Q06409

KPRKTPR

3.44

-7.35

-5.23

RPPFPFF

6.50

-6.60

-4.48

KTPRPPF

8.78

-4.60

-2.48
P32634

VPKAPSR

6.35

-7.11

-4.99

VPTEPTR

6.62

-5.42

-3.30

PLPPVPK

8.80

-6.21

-4.09
Q06833

VPRRPSQ

9.89

-4.06

-1.94

RPVPRRP

10.21

-3.95

-1.83

RRPSQPL

10.66

-3.07

-0.95
P53118

PHDLPSH

9.68

-5.67

-3.55

NPHDLPS

10.76

-2.66

-0.54
Q12199

APATPPR

5.96

-8.07

-5.95

NNPNNPQ

11.40

-2.04

0.08

NPNNPQC

11.41

-3.14

-1.02
P19158

LPDTPTM

10.38

-5.51

-3.39

YDPSLPD

10.48

-3.42

-1.30

PVSPLGL

10.78

-6.02

-3.90
P38870

TPERPKR

4.90

-7.18

-5.06

TPTTPER

6.38

-5.92

-3.80

PERPKRK

7.99

-6.01

-3.89
P43638

GRPIPPH

9.46

-5.27

-3.15

VPTNIPP

10.12

-3.75

-1.63

PDAPKLP

10.15

-4.08

-1.96
P53933

PPPLPNR

3.99

-10.88

-8.76

PGNPTSR

7.74

-5.53

-3.41

LPMELPH

8.28

-5.09

-2.97
P50101

PGSPIDK

9.59

-4.97

-2.85
P40020

PESPLNR

5.22

-8.28

-6.16

NPHSIPF

6.68

-5.57

-3.45

EPTSPTR

6.82

-7.23

-5.11
P38238

SPTNPPY

10.26

-5.12

-3.00

LDPVQSP

11.09

-2.28

-0.16
P00175

CPPYAPG

11.05

-4.55

-2.43
Q08229

NPTIPPR

4.20

-7.85

-5.73

YNPTIPP

9.30

-5.10

-2.98

LPTPVQP

11.13

-5.05

-2.93
P38930

FPDMVPK

5.41

-7.78

-5.66

PDMVPKH

9.32

-5.15

-3.03

DMVPKHP

11.03

-4.29

-2.17
Q12446

LPQLPNR

4.68

-8.87

-6.75

PPPPPRR

5.60

-9.73

-7.61

APPPPPR

5.63

-8.85

-6.73
P32855

APTLPKR

4.39

-8.79

-6.67

NAPTLPK

8.00

-4.25

-2.13

PTLPKRK

9.85

-4.40

-2.28
Q12211

PLPKEPR

5.36

-6.63

-4.51

RPKSGPR

6.87

-3.17

-1.05

NPLPKEP

9.98

-4.08

-1.96
Q06116

SPELVPR

3.46

-8.80

-6.68

SEPVEPF

9.43

-3.02

-0.90

KPFYPVT

10.91

-4.70

-2.58
P50942

PCPPIRR

5.12

-8.44

-6.32

PPPPTSR

5.37

-7.49

-5.37

RPCPPIR

5.69

-8.45

-6.33
P40041

KIPLSPP

11.29

-4.64

-2.52
Q06266

FPSSPYR

5.45

-8.25

-6.13

IPSSPAF

9.35

-4.45

-2.33

SPAFPGQ

10.01

-3.88

-1.76
Q00916

PRPPLSY

7.96

-7.01

-4.89

FKPRPPL

7.99

-5.91

-3.79

LFKPRPP

11.44

-2.40

-0.28
P07269

GPQRPKR

5.84

-7.38

-5.26

SGPQRPK

9.18

-2.70

-0.58

LPNTPDF

9.37

-5.35

-3.23
P40563

TPKVPER

5.82

-6.74

-4.62

TPNVPTR

6.17

-5.54

-3.42

PSERPKR

6.31

-7.97

-5.85
P10566

PMDLPDY

8.72

-7.60

-5.48

PIPAIPM

8.82

-6.00

-3.88

IPMDLPD

11.57

-1.93

0.19
P38289

DPENPSF

9.66

-4.68

-2.56

EDPENPS

11.71

-2.86

-0.74
P47030

FPPEPSM

8.46

-5.92

-3.80

TKPPRAP

11.13

-2.55

-0.43
P32790

PPIKPPR

4.12

-10.99

-8.87

PPAMPAR

4.74

-9.21

-7.09

LPPIKPP

8.50

-5.06

-2.94
P32863

LPDRPPN

10.87

-5.48

-3.36
P32862

VPSTPSR

6.09

-6.78

-4.66

PGSTPQR

7.70

-6.42

-4.30

YRPPNPP

10.47

-4.35

-2.23
P39743

SNPLTSP

10.38

-3.61

-1.49
P31374

PPPPLDF

7.06

-7.56

-5.44

SPERPSF

7.80

-5.58

-3.46

PERPSFR

7.94

-6.42

-4.30
P53169

MPTLPPR

2.96

-9.31

-7.19

IMPTLPP

9.33

-4.14

-2.02

TLPPRPY

9.33

-3.80

-1.68
Q07660

AFKPIGP

10.74

-4.36

-2.24
P53955

NDPRSPL

9.70

-3.27

-1.15

RNPIPYP

10.84

-4.26

-2.14

 


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