ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-1.PDB
Scoring matrix: LSB3_1SSH-1_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.75
Foldx random average score for Saccharomyces cerevisiae: 18.446

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1221995
Proteins after disorder filtering: 4179
 Total fragments: 56732
Proteins after pattern filtering: 2108
 Total fragments: 12890
Proteins after MINT filtering: 73
 Total fragments: 772


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

21.75

-4.72

0.00

Best peptides

KKRRRWMDRW

0.00

-10.49

-5.77

         
Interactors      
P38140

PMNIQPDLPP

14.00

-8.37

-3.65

MNIQPDLPPR

14.83

-8.64

-3.92

QPDLPPRKIM

14.91

-9.62

-4.90

Q06604

MKNKPKPTPP

10.74

-10.40

-5.68

LPTRPNKAEV

11.40

-10.99

-6.27

KGPRMPSRGR

11.48

-7.26

-2.54

P09119

LNSAQVPLTP

17.16

-9.60

-4.88

P24814

NRLHPPDIHP

15.48

-8.44

-3.72

HPNLGPQLWL

15.89

-7.16

-2.44

LHPPDIHPNL

16.71

-7.40

-2.68

P25604

LKPPLPPPPP

12.14

-11.06

-6.34

PKPKSPHLKP

12.50

-8.26

-3.54

KPPLPPPPPP

12.87

-10.56

-5.84

P40956

WNPKNVPFPF

13.84

-11.10

-6.38

ARFWNPKNVP

14.31

-11.56

-6.84

PKNVPFPFDG

14.90

-9.20

-4.48

P25623

SKTKPLPVEP

11.30

-10.95

-6.23

TPPLPPHATP

15.61

-8.56

-3.84

AQTFTPSEVP

15.75

-7.32

-2.60

Q04322

KNDQAPLDRP

12.48

-9.61

-4.89

TPPTLPPRRI

14.82

-9.11

-4.39

TPSKSPTSAV

17.46

-6.87

-2.15

P38266

TPPRPPPSRS

9.85

-11.32

-6.60

IRKRAPTPPA

10.45

-9.07

-4.35

LKKKPPVVPK

10.97

-8.54

-3.82

P47043

KKNKPNPPPG

12.35

-8.80

-4.08

SKKNKPNPPP

12.46

-8.96

-4.24

NKPNPPPGSD

14.00

-7.84

-3.12

P15891

KKSFTPSKSP

12.18

-6.53

-1.81

PKPEVPEDEP

14.32

-9.37

-4.65

SAAPPPPPRR

14.91

-7.86

-3.14

P40341

NNSRNIPPPP

10.11

-9.65

-4.93

SRNIPPPPPP

11.32

-10.12

-5.40

RNIPPPPPPP

14.63

-10.14

-5.42

Q12134

RSTHQPVPSP

17.15

-6.16

-1.44

QPVPSPMNSQ

18.04

-5.80

-1.08

HQPVPSPMNS

18.38

-5.50

-0.78

P40494

DKSRPPRPPP

5.98

-9.54

-4.82

GKDKSRPPRP

10.34

-10.41

-5.69

RPPRPPPKPL

10.47

-11.23

-6.51

Q12200

VCPPSFPSRR

14.36

-8.66

-3.94

GNELPCPVPR

15.30

-7.53

-2.81

PHLKPLKDGV

16.03

-9.45

-4.73

Q12344

SPPLPPRQNV

15.22

-8.00

-3.28

TSPKLPPRGK

15.48

-7.16

-2.44

PKLPPRGKQR

15.51

-4.59

0.13

P53189

TSTLQPSTIP

16.70

-7.76

-3.04

P53238

PAGRPIPPAP

12.51

-10.48

-5.76

QKPAGRPIPP

13.00

-9.21

-4.49

GRPIPPAPTH

13.80

-7.70

-2.98

P32660

GYDPTDPNRP

13.95

-8.15

-3.43

HAPMSPFEDT

15.46

-7.51

-2.79

GDGHAPMSPF

16.52

-4.28

0.44

P33400

SYVQPPNAPS

14.55

-4.98

-0.26

SPQILPPLPV

15.18

-7.56

-2.84

PQILPPLPVG

16.41

-8.43

-3.71

P53901

MAMRPIPPLP

11.99

-10.31

-5.59

NYNQPPLPPI

12.61

-7.36

-2.64

MRPIPPLPTE

13.24

-10.26

-5.54

P38739

SPFHDPILPR

14.91

-6.46

-1.74

TLASPFHDPI

17.16

-9.08

-4.36

LASPFHDPIL

17.81

-7.24

-2.52

Q04749

FNPRKPTLST

12.95

-8.36

-3.64

NNSPLPVLPR

15.84

-5.84

-1.12

NPVFNPRKPT

16.12

-7.79

-3.07

P04051

FQDRSLPHFP

13.25

-11.52

-6.80

DRSLPHFPKN

14.35

-7.69

-2.97

SLPHFPKNSK

16.80

-7.31

-2.59

P43603

QGRFTAPTSP

16.63

-8.71

-3.99

GRFTAPTSPS

17.87

-7.23

-2.51

P40325

SQPRPPPRPQ

9.47

-9.40

-4.68

HQSRPHQRPS

9.47

-8.53

-3.81

QPPRPPRPAA

11.45

-9.82

-5.10

P47129

LPNRKPNPPP

10.18

-10.35

-5.63

RKPNPPPNRS

12.03

-9.70

-4.98

NRKPNPPPNR

13.87

-10.63

-5.91

P40453

LRKRPPPPPP

6.60

-11.72

-7.00

IRLRKRPPPP

7.66

-15.25

-10.53

RKRPPPPPPV

12.93

-9.35

-4.63

P40095

PPPRSPNRPT

12.81

-8.58

-3.86

IPVLPPPRSP

14.53

-9.81

-5.09

NNRIPVLPPP

14.87

-10.34

-5.62

Q12168

NKVQHPVPKP

13.21

-10.77

-6.05

TNRGPPPLPP

14.56

-10.15

-5.43

VQHPVPKPNI

14.61

-7.02

-2.30

P36125

TYSNDLPAGP

14.43

-8.62

-3.90

DLPAGPQGQR

17.76

-5.92

-1.20

SNDLPAGPQG

17.81

-6.14

-1.42

P32793

GHGPTHPSNM

15.95

-10.16

-5.44

P40528

LNDIPITPSH

15.47

-6.66

-1.94

P36123

SYARPGNPLY

11.06

-5.31

-0.59

FPSRSQPSDP

13.61

-9.43

-4.71

LYTTPKTPPR

14.54

-6.28

-1.56

Q08412

KKWQPLPPEP

10.68

-12.63

-7.91

TKKKWQPLPP

11.72

-9.51

-4.79

KKKWQPLPPE

13.03

-9.34

-4.62

Q06697

SSGGPRKDPI

17.72

-6.67

-1.95

Q06409

GKPRKTPRPP

9.22

-10.46

-5.74

RKTPRPPFPF

11.93

-10.25

-5.53

KPRKTPRPPF

11.93

-9.86

-5.14

P32634

CYPLNLPIVP

12.62

-10.11

-5.39

LNIPLPPQEK

14.08

-8.33

-3.61

EKIPLEPLPP

14.57

-8.10

-3.38

Q06833

SNRRPVPRRP

8.56

-12.13

-7.41

VPRRPSQPLN

14.96

-8.79

-4.07

NRRPVPRRPS

15.06

-11.25

-6.53

P53118

ENPHDLPSHL

17.63

-9.08

-4.36

Q12199

NNPNNPQCLH

16.72

-7.86

-3.14

RHICNNPNNP

16.86

-11.16

-6.44

VQPTAAPATP

17.23

-7.81

-3.09

P19158

QSSMTPVSPL

15.46

-6.03

-1.31

EYDPSLPDTP

15.63

-8.45

-3.73

PGEYDPSLPD

18.42

-5.40

-0.68

P38870

IHSTPKPPPN

16.67

-9.28

-4.56

TPTTPERPKR

17.63

-5.99

-1.27

HSTPKPPPND

17.68

-6.73

-2.01

P43638

AKGRPIPPHP

8.82

-7.93

-3.21

GRPIPPHPDA

14.72

-6.94

-2.22

VPTNIPPPRG

15.16

-9.13

-4.41

P53933

TRRRPPPPPI

6.84

-11.87

-7.15

VRTRRRPPPP

7.24

-11.98

-7.26

RTRRRPPPPP

12.86

-11.09

-6.37

P50101

VFPGSPIDKS

17.43

-7.73

-3.01

IGTVFPGSPI

18.28

-5.01

-0.29

P40020

KKSRVLPPLP

8.58

-13.31

-8.59

SFDRPPPLTP

9.77

-11.17

-6.45

SRVLPPLPFP

13.58

-9.99

-5.27

P38238

SSSLDPVQSP

16.49

-6.20

-1.48

VQSPTNPPYK

17.58

-6.26

-1.54

DPVQSPTNPP

17.73

-7.45

-2.73

P00175

TRFLPNHPGG

16.71

-6.76

-2.04

RFLPNHPGGQ

17.70

-9.42

-4.70

Q08229

YLTRPLPSTP

12.61

-12.01

-7.29

YNPTIPPRSK

15.03

-8.69

-3.97

TNDYNPTIPP

15.32

-8.52

-3.80

P38930

FPDMVPKHPT

17.16

-5.94

-1.22

QAFPDMVPKH

17.16

-8.57

-3.85

Q12446

TKHKAPPPPP

10.06

-10.62

-5.90

RNNRPVPPPP

10.10

-10.96

-6.24

TGRRGPAPPP

10.67

-6.97

-2.25

P32855

NNAPTLPKRK

16.25

-7.00

-2.28

NYSNPSSSPN

17.16

-3.84

0.88

LNYSNPSSSP

17.51

-7.89

-3.17

Q12211

IDKRPKSGPR

14.08

-5.22

-0.50

GMQYNPPNPT

14.88

-7.40

-2.68

ENGNPLPKEP

15.02

-10.68

-5.96

Q06116

VKPFYPVTSE

13.03

-6.06

-1.34

KNLHSEPVEP

13.06

-9.62

-4.90

KPFYPVTSEF

15.57

-7.90

-3.18

P33336

PPDRNLPSHP

13.88

-13.22

-8.50

RNLPSHPSSN

17.11

-6.22

-1.50

DRNLPSHPSS

17.67

-5.80

-1.08

P40041

PNGRTLPPVP

11.28

-12.76

-8.04

P50942

PRPCPPIRRK

13.09

-8.83

-4.11

PKPLPPVPAL

13.39

-5.67

-0.95

SKLNVLPPPP

13.49

-11.77

-7.05

Q06266

YRTVDPYSPP

13.94

-9.43

-4.71

NYKQQPNCPS

14.74

-6.54

-1.82

DYPTPFPSSS

14.90

-6.28

-1.56

Q00916

FKPRPPLSYK

9.02

-9.62

-4.90

SYKRPTDYPY

10.37

-8.08

-3.36

SRLFKPRPPL

12.24

-9.40

-4.68

P07269

ASDSGPQRPK

18.05

-4.81

-0.09

NNAPDEDPNL

18.44

-4.21

0.51

P40563

PKRRAPPPVP

6.71

-11.36

-6.64

KRRAPPPVPK

12.20

-11.28

-6.56

PSERPKRRAP

12.32

-9.19

-4.47

P10566

NSTRPIPAIP

12.08

-10.55

-5.83

TRPIPAIPMD

14.91

-8.17

-3.45

IPAIPMDLPD

16.39

-7.92

-3.20

P38289

MYDVPTNDPS

16.94

-6.79

-2.07

VPTNDPSGIL

17.32

-7.25

-2.53

DPENPSFINY

17.79

-5.70

-0.98

P47030

HNANNPLDKP

15.72

-10.61

-5.89

P32790

LPPIKPPRPT

14.36

-8.58

-3.86

GPPPAMPARP

15.69

-8.75

-4.03

KPPRPTSTTS

16.27

-10.10

-5.38

P32863

LPDRPPNGIG

12.29

-10.50

-5.78

P32862

FNYRPPNPPA

11.65

-9.95

-5.23

DFNYRPPNPP

13.92

-10.85

-6.13

QPQLPPPQQQ

15.14

-9.39

-4.67

P39743

AYSNPLTSPV

15.98

-8.46

-3.74

PNATIPEDNP

16.74

-7.72

-3.00

P31374

SPERPSFRQP

12.11

-11.15

-6.43

RKTKPPPPLD

13.48

-9.21

-4.49

EQPRLPSTAS

13.54

-8.43

-3.71

P53169

IMPTLPPRPY

12.96

-9.19

-4.47

VPIMPTLPPR

16.50

-8.53

-3.81

ANSVPIMPTL

17.09

-8.07

-3.35

Q07660

TPSAFKPIGP

18.25

-7.99

-3.27

P53955

LAQRNPIPYP

10.30

-12.92

-8.20

SNQNDPRSPL

14.57

-7.65

-2.93

RNPIPYPIDA

15.10

-7.20

-2.48

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER