ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-19.PDB
Scoring matrix: LSB3_1OOT-19_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.86
Foldx random average score for Saccharomyces cerevisiae: 15.008

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1378057
Proteins after disorder filtering: 4447
 Total fragments: 59180
Proteins after pattern filtering: 1988
 Total fragments: 7467
Proteins after MINT filtering: 64
 Total fragments: 386


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

15.86

0.68

0.00

Best peptides

FDKRHRRRI

0.00

-0.88

-1.56

         
Interactors      
P38140

PDLPPRKIM

7.77

-4.40

-5.08

ANIPPHPYP

13.00

-4.62

-5.30

MNIQPDLPP

14.88

-4.14

-4.82

Q06604

PPSPPAKRI

7.77

-5.06

-5.74

PRMPSRGRP

7.84

-4.51

-5.19

PLLPTRPNK

9.21

-5.36

-6.04

P09119

PLTPTTSPV

13.97

-2.12

-2.80

P24814

RLHPPDIHP

10.94

-6.02

-6.70

IHPNLGPQL

12.99

-2.41

-3.09

HPPDIHPNL

14.05

-1.66

-2.34

P25604

PPKPKSPHL

11.32

-3.49

-4.17

KPKSPHLKP

11.56

-2.02

-2.70

PKSPHLKPP

11.59

-4.95

-5.63

P40956

FWNPKNVPF

12.01

-2.51

-3.19

TSTPPLPRR

12.06

-4.03

-4.71

PPLPRRRAT

13.02

-3.17

-3.85

P25623

PLQPQSKTK

12.53

-4.03

-4.71

PPLPPHATP

12.98

-5.00

-5.68

SQPPLQPQS

13.42

-3.86

-4.54

Q04322

NDQAPLDRP

11.98

-3.99

-4.67

DQAPLDRPQ

13.70

-3.50

-4.18

P38266

PLPPPRGQV

8.43

-4.50

-5.18

PPVPVRMQP

8.61

-3.92

-4.60

PPPKPFRRS

9.13

-4.82

-5.50

P47043

KKNKPNPPP

12.79

-6.08

-6.76

ASDPTSPQQ

13.53

-1.12

-1.80

PQLPPKCSS

14.62

-3.37

-4.05

P15891

RRATPEKKP

11.29

-4.28

-4.96

PPPPRRATP

12.26

-6.01

-6.69

PPLPSRNVA

12.81

-1.70

-2.38

P53169

VPIMPTLPP

14.27

-3.71

-4.39

P40494

KSRPPRPPP

12.21

-5.95

-6.63

PRPPPKPLH

12.43

-4.85

-5.53

INQPPNMMP

12.93

-4.81

-5.49

Q12200

PPSFPSRRC

10.81

-4.58

-5.26

QESCPHLKP

12.67

-4.73

-5.41

ELPCPVPRS

12.99

-3.04

-3.72

Q12344

PPLPPRQNV

9.30

-4.62

-5.30

PKLPPRGKQ

9.56

-4.17

-4.85

PLPPRQNVA

14.79

-3.00

-3.68

P53238

PPAPTHYNN

11.30

-2.60

-3.28

QKPAGRPIP

12.57

-4.24

-4.92

RPIPPAPTH

13.64

-2.02

-2.70

P32660

PTDPNRPKV

10.13

-3.62

-4.30

PMSPFEDTF

12.57

-2.74

-3.42

GYDPTDPNR

12.60

-3.26

-3.94

P33400

PPNAPSYQS

11.53

-1.89

-2.57

QILPPLPVG

13.37

-4.45

-5.13

VQPPNAPSY

13.92

-2.23

-2.91

P53901

PPLPTTSNS

13.15

-1.99

-2.67

YNQPPLPPI

13.51

-4.44

-5.12

PPLPPIPTR

13.98

-4.18

-4.86

P38739

LASPFHDPI

13.80

-3.11

-3.79

Q04749

SPLPVLPRR

10.99

-2.31

-2.99

PLPVLPRRI

13.65

-5.41

-6.09

VFNPRKPTL

13.79

-2.19

-2.87

P04051

RSLPHFPKN

13.78

-2.12

-2.80

PHFPKNSKT

14.84

-1.70

-2.38

P40325

PRPPPRPQQ

9.01

-3.87

-4.55

HQSRPHQRP

9.25

-5.36

-6.04

YVQPGDPRL

11.26

-3.98

-4.66

P47129

PLLPPRNTM

11.91

-4.74

-5.42

NTLPNRKPN

13.42

-4.57

-5.25

PNPPPNRSQ

14.91

-4.85

-5.53

P40453

PDLPIRLRK

5.52

-6.11

-6.79

WKPPDLPIR

10.42

-3.36

-4.04

VPEPPSWKP

10.91

-3.19

-3.87

P40095

PRSPNRPTL

10.30

-2.46

-3.14

LPPPRSPNR

12.36

-3.59

-4.27

VLPPPRSPN

13.24

-4.92

-5.60

Q12168

PPLPPRANV

9.11

-4.43

-5.11

PPVPNRPGG

10.82

-2.58

-3.26

NDDPYFPQF

11.42

-2.32

-3.00

P36125

NDLPAGPQG

9.56

-2.17

-2.85

PAGPQGQRR

9.59

-6.50

-7.18

LPAGPQGQR

13.35

-1.91

-2.59

P40528

NDIPITPSH

14.49

-2.89

-3.57

PLPYPIAQV

14.57

-3.58

-4.26

P36123

PKTPPRPKT

10.95

-3.75

-4.43

YARPGNPLY

12.26

-3.41

-4.09

SLFPPDHFP

13.21

-4.66

-5.34

Q08412

PQLPTRTKS

11.18

-2.42

-3.10

IELPTQPVR

12.38

-2.62

-3.30

LPTQPVRKN

13.06

-2.92

-3.60

P32855

NNAPTLPKR

14.23

-3.00

-3.68

Q06409

GKPRKTPRP

9.90

-4.11

-4.79

PRKTPRPPF

11.56

-3.37

-4.05

STGKPRKTP

11.75

-4.53

-5.21

P32634

PTEPTRYNY

7.93

-3.76

-4.44

IPLPPQEKI

10.50

-2.67

-3.35

EKIPLEPLP

11.65

-4.52

-5.20

Q06833

RRPVPRRPS

11.57

-4.88

-5.56

RPVPRRPSQ

12.89

-2.57

-3.25

PRRPSQPLN

13.63

-3.31

-3.99

P50101

PGSPIDKSI

11.67

-4.01

-4.69

P53118

VENPHDLPS

14.66

-1.31

-1.99

Q12199

PATPPRHIC

9.85

-4.07

-4.75

CNNPNNPQC

12.40

-2.52

-3.20

GITTPSVQP

13.73

-4.23

-4.91

P19158

SMTPVSPLG

12.49

-3.33

-4.01

P43638

PKLPSAFRK

9.71

-3.51

-4.19

PPHPDAPKL

11.96

-2.68

-3.36

PDAPKLPSA

13.41

-3.01

-3.69

P53933

PPLPNRQLP

10.27

-4.28

-4.96

VAPPPLPNR

12.15

-5.35

-6.03

PPIPSTQKP

13.56

-3.76

-4.44

P32790

PIKPPRPTS

12.26

-5.21

-5.89

PAMPARPTA

12.74

-2.19

-2.87

PLDPFKTGG

13.21

-2.90

-3.58

P40020

EPTSPTRQV

11.04

-1.01

-1.69

PPLTPEKNL

12.07

-3.81

-4.49

PLTPEKNLY

12.36

-4.36

-5.04

P38238

VQSPTNPPY

14.08

-2.45

-3.13

P00175

RFLPNHPGG

12.04

-2.55

-3.23

LPNHPGGQD

13.52

-2.45

-3.13

LVCPPYAPG

14.48

-3.33

-4.01

Q08229

TPVQPGGHY

10.98

-2.75

-3.43

PVQPGGHYK

12.06

-4.32

-5.00

PTIPPRSKD

12.32

-3.66

-4.34

P38930

QAFPDMVPK

14.21

-2.65

-3.33

FPDMVPKHP

14.89

-4.85

-5.53

Q12446

PQLPNRNNR

9.30

-4.89

-5.57

PPPPPHRHV

9.56

-5.53

-6.21

PPPPPRRGP

10.65

-6.39

-7.07

Q12211

KRPKSGPRL

7.73

-3.54

-4.22

IDKRPKSGP

10.88

-5.28

-5.96

DKRPKSGPR

12.93

-2.28

-2.96

Q06116

NGVKPFYPV

13.03

-3.65

-4.33

EPNSPELVP

14.66

-1.66

-2.34

P33336

LPSHPSSNN

14.98

-2.69

-3.37

P50942

PCPPIRRKS

8.75

-4.25

-4.93

RPCPPIRRK

9.42

-3.87

-4.55

GKIVPRPCP

10.41

-5.13

-5.81

Q06266

PYSPPNYKQ

11.15

-2.85

-3.53

FPSSPYRTV

11.78

-2.41

-3.09

QPNCPSSNY

12.57

-2.24

-2.92

Q00916

PRPPLSYKR

9.26

-5.03

-5.71

YKRPTDYPY

10.29

-2.98

-3.66

RLFKPRPPL

10.97

-4.96

-5.64

P07269

DSGPQRPKR

12.27

-3.30

-3.98

PNTPDFLKN

13.23

-2.52

-3.20

PDEDPNLNN

13.29

-1.19

-1.87

P40563

PSERPKRRA

8.77

-6.28

-6.96

GMVNPGQLP

12.73

-4.12

-4.80

AGTPNVPTR

13.77

-2.92

-3.60

P10566

IPAIPMDLP

14.76

-2.39

-3.07

P38289

PENPSFINY

12.29

-3.99

-4.67

YDVPTNDPS

14.16

-1.26

-1.94

P47030

FPPEPSMSS

14.32

-1.69

-2.37

P32863

PDRPPNGIG

10.35

-3.12

-3.80

P32862

PSTPSRSNS

12.32

-2.11

-2.79

PPNPPANNP

13.17

-4.32

-5.00

EASSPGSTP

13.82

-3.35

-4.03

P39743

YSNPLTSPV

14.99

-2.66

-3.34

P31374

PERPSFRQP

10.03

-5.14

-5.82

SPERPSFRQ

10.28

-1.58

-2.26

PPSPDQENH

11.88

-2.27

-2.95

P38870

PTTPERPKR

10.48

-5.05

-5.73

TPERPKRKS

11.41

-2.58

-3.26

 


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