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Matrix information:
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ADAN-name: LSB1_1CKB-9.PDB
Scoring matrix: LSB1_1CKB-9_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.18
Foldx random average score for Saccharomyces cerevisiae: 12.512 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1366665
Proteins after disorder filtering: 4382
Total fragments: 55328
Proteins after pattern filtering: 2173
Total fragments: 11928
Proteins after MINT filtering: 28
Total fragments: 424
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
17.18
|
-2.96 |
0.00 |
| Best peptides |
RPPIRPFW |
0.00
|
-5.72 |
-2.76 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
LLPTRPNK |
7.63
|
-6.90 |
-3.94 |
|
KPLLPTRP |
7.79
|
-8.65 |
-5.69 |
|
LPTRPNKA |
7.87
|
-8.10 |
-5.14 |
| P53120 |
YEPECPVA |
9.99
|
-4.34 |
-1.38 |
|
RSYEPECP |
10.27
|
-8.29 |
-5.33 |
|
EPECPVAY |
11.03
|
-7.07 |
-4.11 |
| Q04322 |
SPPLPPRA |
8.49
|
-8.68 |
-5.72 |
|
PPTLPPRR |
9.55
|
-9.29 |
-6.33 |
|
TPPTLPPR |
10.94
|
-6.51 |
-3.55 |
| Q12168 |
PPPLPPRA |
8.33
|
-7.55 |
-4.59 |
|
PPPVPNRP |
8.68
|
-9.06 |
-6.10 |
|
VPNRPGGT |
9.85
|
-6.68 |
-3.72 |
| P53169 |
MPTLPPRP |
6.68
|
-9.49 |
-6.53 |
|
VPIMPTLP |
8.37
|
-7.95 |
-4.99 |
|
SVPIMPTL |
9.87
|
-5.97 |
-3.01 |
| Q12344 |
SPPLPPRQ |
8.73
|
-8.62 |
-5.66 |
|
SPKLPPRG |
9.73
|
-6.89 |
-3.93 |
|
TSPKLPPR |
11.57
|
-4.24 |
-1.28 |
| Q07533 |
LPPLPPLP |
5.19
|
-9.44 |
-6.48 |
|
LPPLPDLD |
6.35
|
-8.13 |
-5.17 |
|
IPPVPSRY |
6.71
|
-9.05 |
-6.09 |
| P53238 |
GRPIPPAP |
8.11
|
-7.68 |
-4.72 |
|
RPIPPAPT |
8.33
|
-7.76 |
-4.80 |
|
IPPAPTHY |
9.20
|
-8.04 |
-5.08 |
| P08417 |
LPENEPGS |
11.90
|
-3.58 |
-0.62 |
|
MLPENEPG |
12.40
|
-2.98 |
-0.02 |
| P39521 |
TPHVPDRP |
9.58
|
-7.91 |
-4.95 |
|
PKPKPAQD |
10.13
|
-6.78 |
-3.82 |
|
HVPDRPPS |
10.21
|
-7.05 |
-4.09 |
| P04050 |
PPPVRPSI |
8.50
|
-8.24 |
-5.28 |
|
CLPVPPPP |
8.90
|
-7.96 |
-5.00 |
|
VPPPPVRP |
10.15
|
-7.42 |
-4.46 |
| P40453 |
PPPLPPKI |
7.41
|
-8.91 |
-5.95 |
|
LRKRPPPP |
7.42
|
-8.73 |
-5.77 |
|
KVPEPPSW |
7.73
|
-6.65 |
-3.69 |
| P19812 |
RPRRIPPT |
7.99
|
-11.48 |
-8.52 |
|
PRPRRIPP |
8.49
|
-6.87 |
-3.91 |
|
PRRIPPTD |
9.10
|
-6.00 |
-3.04 |
| Q03780 |
RPPPPPMD |
6.46
|
-11.35 |
-8.39 |
|
KRSRPPPP |
7.68
|
-8.23 |
-5.27 |
|
APDIPPRS |
8.62
|
-7.60 |
-4.64 |
| P48582 |
APPLPPLD |
7.73
|
-8.28 |
-5.32 |
|
APPVPPKQ |
8.20
|
-8.10 |
-5.14 |
|
GPGIPPRT |
8.64
|
-7.51 |
-4.55 |
| P53933 |
RPPPPPIP |
6.80
|
-10.86 |
-7.90 |
|
RRPPPPPI |
7.58
|
-8.27 |
-5.31 |
|
PPPIPSTQ |
8.52
|
-8.42 |
-5.46 |
| Q08229 |
NPTIPPRS |
7.25
|
-7.21 |
-4.25 |
|
TRPLPSTP |
8.50
|
-6.88 |
-3.92 |
|
LPSTPNED |
10.61
|
-5.92 |
-2.96 |
| P33338 |
RTPTPTPP |
8.87
|
-7.14 |
-4.18 |
|
RTPARTPT |
9.19
|
-8.42 |
-5.46 |
|
TPARTPTP |
10.70
|
-4.32 |
-1.36 |
| P32893 |
NGTIPNSP |
11.42
|
-4.96 |
-2.00 |
| Q12446 |
LPPLPNQF |
5.60
|
-9.43 |
-6.47 |
|
NRPLPQLP |
6.76
|
-7.14 |
-4.18 |
|
NRPVPPPP |
7.22
|
-7.42 |
-4.46 |
| P40483 |
KPSVPPRN |
8.12
|
-7.90 |
-4.94 |
|
PASKPSVP |
11.83
|
-6.12 |
-3.16 |
| P39940 |
DPRLPSSL |
10.90
|
-6.54 |
-3.58 |
|
WDDPRLPS |
11.66
|
-3.88 |
-0.92 |
|
DDPRLPSS |
12.22
|
-4.35 |
-1.39 |
| P38266 |
KPPVVPKK |
5.46
|
-8.15 |
-5.19 |
|
QPPVPVRM |
6.71
|
-8.65 |
-5.69 |
|
VPPVVPKK |
7.07
|
-7.21 |
-4.25 |
| Q04659 |
KDPTVPNG |
10.84
|
-4.81 |
-1.85 |
|
DPTVPNGL |
11.84
|
-6.74 |
-3.78 |
| P40563 |
PPPVPKKP |
7.90
|
-9.33 |
-6.37 |
|
RRAPPPVP |
8.35
|
-7.23 |
-4.27 |
|
APPPVPKK |
9.25
|
-6.76 |
-3.80 |
| P00812 |
PLYIPATG |
10.09
|
-6.70 |
-3.74 |
|
NKDVPHCP |
10.37
|
-6.99 |
-4.03 |
|
VPHCPESL |
10.99
|
-5.93 |
-2.97 |
| Q04195 |
NEPIQFPF |
7.36
|
-5.29 |
-2.33 |
|
LPTLPQNV |
8.89
|
-7.80 |
-4.84 |
|
EPIQFPFP |
8.92
|
-8.13 |
-5.17 |
| P43582 |
PPQVPSGW |
9.50
|
-8.26 |
-5.30 |
|
NPPQVPSG |
9.54
|
-4.69 |
-1.73 |
|
PRPKGPPP |
9.58
|
-5.58 |
-2.62 |
|
