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Matrix information:
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ADAN-name: LSB1_1CKB-7.PDB
Scoring matrix: LSB1_1CKB-7_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 13.11
Foldx random average score for Saccharomyces cerevisiae: 10.128 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1359732
Proteins after disorder filtering: 4567
Total fragments: 74476
Proteins after pattern filtering: 2169
Total fragments: 12462
Proteins after MINT filtering: 26
Total fragments: 464
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAA |
13.11
|
-3.10 |
0.00 |
| Best peptides |
KKPIHPFR |
0.00
|
-6.04 |
-2.94 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
KPAPPVSR |
5.31
|
-5.44 |
-2.34 |
|
PPPLPTRR |
5.31
|
-6.60 |
-3.50 |
|
KGPRMPSR |
5.81
|
-3.98 |
-0.88 |
| P53120 |
EPECPVAY |
9.74
|
-4.43 |
-1.33 |
|
YEPECPVA |
9.98
|
-2.30 |
0.80 |
| Q04322 |
PPTLPPRR |
5.16
|
-7.08 |
-3.98 |
|
SPPLPPRA |
6.46
|
-6.52 |
-3.42 |
|
TPPTLPPR |
6.79
|
-4.04 |
-0.94 |
| P19812 |
PRRIPPTD |
6.46
|
-6.94 |
-3.84 |
|
SPIFRPGN |
7.84
|
-4.69 |
-1.59 |
|
PQNPPPIL |
8.38
|
-6.28 |
-3.18 |
| P53169 |
IMPTLPPR |
5.88
|
-6.20 |
-3.10 |
|
MPTLPPRP |
7.47
|
-6.39 |
-3.29 |
|
SVPIMPTL |
8.68
|
-4.63 |
-1.53 |
| Q12344 |
SPPLPPRQ |
6.01
|
-6.29 |
-3.19 |
|
SPKLPPRG |
6.58
|
-6.00 |
-2.90 |
|
TSPKLPPR |
7.36
|
-4.29 |
-1.19 |
| Q07533 |
IPPVPSRY |
4.15
|
-7.63 |
-4.53 |
|
KSDPHFPY |
6.58
|
-4.75 |
-1.65 |
|
SDPHFPYG |
7.24
|
-4.77 |
-1.67 |
| P53238 |
IPPAPTHY |
6.10
|
-7.55 |
-4.45 |
|
KPAGRPIP |
8.45
|
-5.59 |
-2.49 |
|
PPAPTHYN |
8.51
|
-5.20 |
-2.10 |
| P39521 |
PKPKPAQD |
7.02
|
-7.26 |
-4.16 |
|
TPHVPDRP |
7.76
|
-5.23 |
-2.13 |
|
QPKPKPAQ |
7.93
|
-4.95 |
-1.85 |
| P04050 |
PVPPPPVR |
6.59
|
-6.16 |
-3.06 |
|
SPAYSPKQ |
6.69
|
-3.24 |
-0.14 |
|
YSPTSPNY |
6.76
|
-4.50 |
-1.40 |
| P40453 |
KPPDLPIR |
4.95
|
-4.96 |
-1.86 |
|
IPPPLPPK |
6.81
|
-4.44 |
-1.34 |
|
PPPLPPKI |
6.90
|
-7.84 |
-4.74 |
| Q12168 |
DPYFPQFR |
6.33
|
-6.73 |
-3.63 |
|
PPPLPPRA |
6.56
|
-7.27 |
-4.17 |
|
QHPVPKPN |
7.26
|
-5.36 |
-2.26 |
| Q03780 |
IPPRSPNR |
3.78
|
-5.64 |
-2.54 |
|
RPPPPPMD |
4.77
|
-7.85 |
-4.75 |
|
APDIPPRS |
6.36
|
-6.94 |
-3.84 |
| P48582 |
APPLPPLD |
5.47
|
-7.06 |
-3.96 |
|
APPVPPKQ |
6.42
|
-7.13 |
-4.03 |
|
TPPQPSLL |
6.55
|
-6.01 |
-2.91 |
| Q04659 |
QKDPTVPN |
8.79
|
-4.76 |
-1.66 |
|
PTVPNGLD |
10.07
|
-4.02 |
-0.92 |
| P53933 |
YPGNPTSR |
6.67
|
-5.22 |
-2.12 |
|
PPPLPNRQ |
6.76
|
-7.17 |
-4.07 |
|
APPPLPNR |
6.82
|
-5.08 |
-1.98 |
| Q08229 |
NPTIPPRS |
6.59
|
-6.09 |
-2.99 |
|
TPVQPGGH |
8.19
|
-3.70 |
-0.60 |
|
RPLPSTPN |
8.22
|
-3.74 |
-0.64 |
| P33338 |
TPARTPAR |
7.96
|
-0.92 |
2.18 |
|
TPTPPVVA |
8.32
|
-4.75 |
-1.65 |
|
PARTPART |
8.69
|
-5.24 |
-2.14 |
| P43582 |
PPQVPSGW |
8.77
|
-6.47 |
-3.37 |
|
KSNPPQVP |
8.94
|
-6.44 |
-3.34 |
|
PKGPPPGV |
9.18
|
-6.02 |
-2.92 |
| P39940 |
PRLPSSLD |
6.88
|
-6.25 |
-3.15 |
|
WDDPRLPS |
8.91
|
-4.99 |
-1.89 |
|
DPRLPSSL |
9.79
|
-4.47 |
-1.37 |
| P38266 |
QPPPKPFR |
3.58
|
-7.66 |
-4.56 |
|
MPPPKPFR |
3.90
|
-8.24 |
-5.14 |
|
QPPVPVRM |
5.54
|
-6.48 |
-3.38 |
| P40483 |
KPSVPPRN |
3.75
|
-7.97 |
-4.87 |
|
PSVPPRNY |
9.08
|
-5.55 |
-2.45 |
|
KDAPASKP |
9.92
|
-4.09 |
-0.99 |
| P40563 |
PSERPKRR |
6.12
|
-6.66 |
-3.56 |
|
TPKVPERP |
7.47
|
-5.64 |
-2.54 |
|
PPPVPKKP |
8.43
|
-7.07 |
-3.97 |
| P00812 |
KDVPHCPE |
7.32
|
-5.00 |
-1.90 |
|
PLYIPATG |
8.49
|
-6.50 |
-3.40 |
|
NKDVPHCP |
8.82
|
-7.04 |
-3.94 |
| Q04195 |
EPIQFPFP |
8.20
|
-6.82 |
-3.72 |
|
TPVLPTLP |
8.46
|
-6.10 |
-3.00 |
|
PQNVPIRT |
8.78
|
-5.67 |
-2.57 |
| Q12446 |
APPPPPRR |
4.77
|
-7.03 |
-3.93 |
|
APPPPPHR |
4.79
|
-7.30 |
-4.20 |
|
PPPPPAFL |
5.81
|
-8.54 |
-5.44 |
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