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Matrix information:
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ADAN-name: LSB1_1CKB-28.PDB
Scoring matrix: LSB1_1CKB-28_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.83
Foldx random average score for Saccharomyces cerevisiae: 16.073 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1517964
Proteins after disorder filtering: 4228
Total fragments: 52583
Proteins after pattern filtering: 2077
Total fragments: 10604
Proteins after MINT filtering: 26
Total fragments: 317
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
18.83
|
-0.50 |
0.00 |
| Best peptides |
RPRWFPFPMQ |
0.00
|
-5.65 |
-5.15 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
RVKPAPPVSR |
10.90
|
-6.98 |
-6.48 |
|
LPTRPNKAEV |
11.42
|
-7.72 |
-7.22 |
|
KPTPPSPPAK |
12.39
|
-8.64 |
-8.14 |
| P53120 |
RSYEPECPVA |
11.63
|
-6.87 |
-6.37 |
| Q04322 |
TPPTLPPRRI |
11.37
|
-7.23 |
-6.73 |
|
TPSKSPTSAV |
12.91
|
-4.64 |
-4.14 |
|
DQAPLDRPQL |
14.57
|
-5.34 |
-4.84 |
| P19812 |
RPRRIPPTDE |
7.63
|
-10.16 |
-9.66 |
|
APQNPPPILQ |
9.70
|
-8.58 |
-8.08 |
|
HSPIFRPGNI |
12.95
|
-7.78 |
-7.28 |
| P53169 |
ANSVPIMPTL |
13.43
|
-7.88 |
-7.38 |
|
SPAQPSASLT |
14.17
|
-5.30 |
-4.80 |
|
VPIMPTLPPR |
14.46
|
-9.21 |
-8.71 |
| Q12344 |
SPKLPPRGKQ |
10.77
|
-8.22 |
-7.72 |
|
TSSPPLPPRQ |
11.50
|
-7.06 |
-6.56 |
|
SPPLPPRQNV |
13.60
|
-7.60 |
-7.10 |
| P00812 |
KDVPHCPESL |
12.02
|
-4.90 |
-4.40 |
|
VPHCPESLKW |
14.64
|
-6.37 |
-5.87 |
|
VDPLYIPATG |
15.15
|
-7.51 |
-7.01 |
| P53238 |
RPIPPAPTHY |
8.25
|
-8.79 |
-8.29 |
|
IPPAPTHYNN |
14.59
|
-5.85 |
-5.35 |
|
KPAGRPIPPA |
16.05
|
-6.76 |
-6.26 |
| P08417 |
LPENEPGSSI |
14.91
|
-4.83 |
-4.33 |
|
PENEPGSSIM |
15.28
|
-5.69 |
-5.19 |
|
MLPENEPGSS |
15.55
|
-3.73 |
-3.23 |
| P39521 |
PHVPDRPPSQ |
12.88
|
-3.73 |
-3.23 |
|
DAQPKPKPAQ |
13.41
|
-4.97 |
-4.47 |
|
HVPDRPPSQL |
13.52
|
-7.94 |
-7.44 |
| P04050 |
VPPPPVRPSI |
10.55
|
-7.64 |
-7.14 |
|
CLPVPPPPVR |
12.20
|
-7.81 |
-7.31 |
|
PPPVRPSISF |
12.49
|
-7.09 |
-6.59 |
| P40453 |
RPPPPPPVSM |
6.37
|
-9.42 |
-8.92 |
|
KPPDLPIRLR |
10.39
|
-9.16 |
-8.66 |
|
EIPPPLPPKI |
11.85
|
-9.15 |
-8.65 |
| Q12168 |
PPLPPRANVQ |
10.79
|
-9.58 |
-9.08 |
|
RGPPPLPPRA |
11.04
|
-7.61 |
-7.11 |
|
PVPKPNIDDQ |
12.39
|
-6.65 |
-6.15 |
| Q03780 |
RPPPPPMDMK |
6.33
|
-12.10 |
-11.60 |
|
RSRPPPPPMD |
9.93
|
-7.94 |
-7.44 |
|
PPPPMDMKSI |
10.92
|
-9.73 |
-9.23 |
| P48582 |
APPVPPKQSQ |
8.93
|
-7.96 |
-7.46 |
|
MAAPPVPPKQ |
9.02
|
-8.81 |
-8.31 |
|
RNTPPQPSLL |
9.88
|
-8.85 |
-8.35 |
| P53933 |
RPPPPPIPST |
8.40
|
-9.14 |
-8.64 |
|
PPPPPIPSTQ |
9.82
|
-9.25 |
-8.75 |
|
RVAPPPLPNR |
9.86
|
-10.06 |
-9.56 |
| Q08229 |
RPLPSTPNED |
10.51
|
-7.33 |
-6.83 |
|
LPSTPNEDSR |
14.09
|
-6.25 |
-5.75 |
|
YNPTIPPRSK |
14.39
|
-5.99 |
-5.49 |
| P33338 |
RTPTPTPPVV |
10.88
|
-7.48 |
-6.98 |
|
VTPARTPART |
14.62
|
-7.06 |
-6.56 |
|
RTPARTPTPT |
14.73
|
-6.29 |
-5.79 |
| P43582 |
RPKGPPPGVN |
11.15
|
-8.47 |
-7.97 |
|
PRPKGPPPGV |
14.33
|
-5.38 |
-4.88 |
|
KSNPPQVPSG |
14.63
|
-5.87 |
-5.37 |
| P39940 |
WDDPRLPSSL |
11.49
|
-5.39 |
-4.89 |
|
DPRLPSSLDQ |
13.95
|
-7.45 |
-6.95 |
|
DDPRLPSSLD |
15.66
|
-4.24 |
-3.74 |
| P38266 |
FPPPPLKPGQ |
8.10
|
-7.93 |
-7.43 |
|
PPPKPFRRSQ |
8.39
|
-8.61 |
-8.11 |
|
QPQPPQPMQQ |
8.95
|
-9.26 |
-8.76 |
| P40483 |
KPSVPPRNYF |
11.56
|
-8.25 |
-7.75 |
|
KDAPASKPSV |
13.08
|
-4.37 |
-3.87 |
|
ASKPSVPPRN |
14.84
|
-3.62 |
-3.12 |
| P40563 |
RRAPPPVPKK |
8.56
|
-9.77 |
-9.27 |
|
NPGQLPPSLE |
11.28
|
-6.08 |
-5.58 |
|
PPTPAGTPNV |
14.64
|
-5.34 |
-4.84 |
| Q07533 |
LPPLPDLDNM |
11.87
|
-10.44 |
-9.94 |
|
LPPLPPLPDL |
12.56
|
-8.72 |
-8.22 |
|
IPPVPSRYSD |
12.90
|
-7.19 |
-6.69 |
| Q04195 |
RAPPPTNPDA |
11.94
|
-5.80 |
-5.30 |
|
SSHPSEPIII |
13.14
|
-4.64 |
-4.14 |
|
HPSEPIIINL |
13.28
|
-5.99 |
-5.49 |
| Q12446 |
RPVPPPPPMR |
6.09
|
-9.73 |
-9.23 |
|
NPFPFPVPQQ |
7.84
|
-8.18 |
-7.68 |
|
PPPPPAFLTQ |
9.27
|
-7.77 |
-7.27 |
|
