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Matrix information:
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ADAN-name: LSB1_1CKB-27.PDB
Scoring matrix: LSB1_1CKB-27_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 13.83
Foldx random average score for Saccharomyces cerevisiae: 14.546 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3207542
Proteins after random average filtering: 7179
Total fragments: 1920935
Proteins after disorder filtering: 4738
Total fragments: 167114
Proteins after pattern filtering: 2319
Total fragments: 22354
Proteins after MINT filtering: 27
Total fragments: 769
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
13.83
|
5.63 |
0.00 |
| Best peptides |
HRPGDHIRR |
0.00
|
-0.38 |
-6.01 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
FEKGPRMPS |
4.22
|
-5.15 |
-10.78 |
|
KGPRMPSRG |
7.36
|
-2.72 |
-8.35 |
|
NKPKPTPPS |
8.73
|
3.74 |
-1.89 |
| P53120 |
SYEPECPVA |
10.92
|
2.78 |
-2.85 |
|
RSYEPECPV |
12.28
|
2.31 |
-3.32 |
|
YEPECPVAY |
13.81
|
2.57 |
-3.06 |
| Q04322 |
TSPPLPPRA |
8.53
|
-0.87 |
-6.50 |
|
STPPTLPPR |
9.56
|
1.35 |
-4.28 |
|
ATPSKSPTS |
10.40
|
0.82 |
-4.81 |
| Q12168 |
TNRGPPPLP |
4.79
|
-1.68 |
-7.31 |
|
RGPPPLPPR |
6.84
|
-1.52 |
-7.15 |
|
GPPPLPPRA |
7.92
|
-3.77 |
-9.40 |
| P53169 |
TANSVPIMP |
10.41
|
-1.46 |
-7.09 |
|
PIMPTLPPR |
10.79
|
1.06 |
-4.57 |
|
NSVPIMPTL |
10.83
|
2.92 |
-2.71 |
| Q12344 |
TSPKLPPRG |
7.70
|
1.78 |
-3.85 |
|
SSPPLPPRQ |
7.99
|
-1.18 |
-6.81 |
|
STSPKLPPR |
8.44
|
1.69 |
-3.94 |
| Q07533 |
KSPKAYPKL |
8.43
|
3.15 |
-2.48 |
|
SMNNPLPPL |
8.66
|
-1.93 |
-7.56 |
|
MNNPLPPLP |
9.06
|
-0.44 |
-6.07 |
| P53238 |
KPAGRPIPP |
2.97
|
-2.46 |
-8.09 |
|
PAGRPIPPA |
8.18
|
1.71 |
-3.92 |
|
QKPAGRPIP |
9.40
|
-2.08 |
-7.71 |
| P08417 |
LMLPENEPG |
11.17
|
-1.29 |
-6.92 |
|
LPENEPGSS |
12.55
|
1.46 |
-4.17 |
|
MLPENEPGS |
12.85
|
6.40 |
0.77 |
| P39521 |
PHVPDRPPS |
8.51
|
-0.78 |
-6.41 |
|
VPDRPPSQL |
10.26
|
0.36 |
-5.27 |
|
AQPKPKPAQ |
11.11
|
4.51 |
-1.12 |
| P04050 |
SSPGFSPTS |
5.61
|
2.08 |
-3.55 |
|
YSPGSPAYS |
6.27
|
0.23 |
-5.40 |
|
TSPGYSPGS |
6.92
|
2.20 |
-3.43 |
| P40453 |
LRKRPPPPP |
5.60
|
-3.33 |
-8.96 |
|
RLRKRPPPP |
6.57
|
1.83 |
-3.80 |
|
WKPPDLPIR |
6.81
|
-3.35 |
-8.98 |
| P19812 |
PRPRRIPPT |
6.58
|
1.87 |
-3.76 |
|
RPRRIPPTD |
7.42
|
3.63 |
-2.00 |
|
EPRPRRIPP |
8.19
|
0.39 |
-5.24 |
| Q03780 |
KRSRPPPPP |
6.09
|
0.19 |
-5.44 |
|
RSRPPPPPM |
7.25
|
-2.20 |
-7.83 |
|
IKRSRPPPP |
7.29
|
-1.64 |
-7.27 |
| P48582 |
QGPGIPPRT |
3.24
|
-1.08 |
-6.71 |
|
LPQGPGIPP |
3.66
|
-5.13 |
-10.76 |
|
VVGGPPLLP |
6.75
|
-1.91 |
-7.54 |
| P53933 |
RTRRRPPPP |
6.03
|
0.88 |
-4.75 |
|
TRRRPPPPP |
6.65
|
1.04 |
-4.59 |
|
SYPGNPTSR |
6.84
|
-0.46 |
-6.09 |
| Q08229 |
NDYNPTIPP |
9.49
|
-0.55 |
-6.18 |
|
YNPTIPPRS |
10.00
|
0.49 |
-5.14 |
|
RPLPSTPNE |
10.39
|
1.27 |
-4.36 |
| P33338 |
SWSGPLTPP |
5.66
|
-2.04 |
-7.67 |
|
WSGPLTPPT |
8.71
|
-0.17 |
-5.80 |
|
TPARTPTPT |
10.18
|
0.17 |
-5.46 |
| P43582 |
RPKGPPPGV |
5.06
|
-1.59 |
-7.22 |
|
WPRPKGPPP |
7.61
|
-1.78 |
-7.41 |
|
PRPKGPPPG |
8.60
|
1.18 |
-4.45 |
| P40483 |
SKPSVPPRN |
8.09
|
-0.61 |
-6.24 |
|
ASKPSVPPR |
9.16
|
-3.62 |
-9.25 |
|
PASKPSVPP |
10.29
|
3.36 |
-2.27 |
| P39940 |
WDDPRLPSS |
9.68
|
1.46 |
-4.17 |
|
PSSSPHSQA |
10.94
|
0.96 |
-4.67 |
|
DDPRLPSSL |
11.35
|
3.21 |
-2.42 |
| P38266 |
PVGGQPPVP |
6.58
|
0.50 |
-5.13 |
|
KDPKSFPPP |
6.72
|
3.53 |
-2.10 |
|
VLPGHPSEE |
7.36
|
1.61 |
-4.02 |
| Q04659 |
SVQKDPTVP |
10.41
|
5.68 |
0.05 |
|
QKDPTVPNG |
12.45
|
2.42 |
-3.21 |
|
PTVPNGLDG |
13.18
|
2.67 |
-2.96 |
| P40563 |
VNPGQLPPS |
4.16
|
-0.36 |
-5.99 |
|
RRAPPPVPK |
8.03
|
-1.82 |
-7.45 |
|
KRRAPPPVP |
8.46
|
-3.97 |
-9.60 |
| P00812 |
GVDPLYIPA |
9.23
|
-1.84 |
-7.47 |
|
KDVPHCPES |
10.01
|
1.66 |
-3.97 |
|
VPHCPESLK |
10.65
|
-0.36 |
-5.99 |
| Q04195 |
SHPSEPIII |
8.40
|
2.03 |
-3.60 |
|
LPQNVPIRT |
8.46
|
-1.31 |
-6.94 |
|
SSSHPSEPI |
9.20
|
-0.16 |
-5.79 |
| Q12446 |
GRRGPAPPP |
3.44
|
-5.06 |
-10.69 |
|
PRRGPAPPP |
4.14
|
-3.81 |
-9.44 |
|
RNNRPVPPP |
6.67
|
-0.27 |
-5.90 |
|
