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Matrix information:
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ADAN-name: LSB1_1CKA-8.PDB
Scoring matrix: LSB1_1CKA-8_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.63
Foldx random average score for Saccharomyces cerevisiae: 12.412 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3214721
Proteins after random average filtering: 7179
Total fragments: 1472095
Proteins after disorder filtering: 4713
Total fragments: 114891
Proteins after pattern filtering: 2304
Total fragments: 17995
Proteins after MINT filtering: 28
Total fragments: 679
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
13.63
|
-2.31 |
0.00 |
| Best peptides |
RWFWLPPF |
0.00
|
-0.02 |
2.29 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
SPPPLPTR |
4.62
|
-9.18 |
-6.87 |
|
EKPLLPTR |
5.50
|
-8.93 |
-6.62 |
|
KGPRMPSR |
6.49
|
-6.73 |
-4.42 |
| P53120 |
YEPECPVA |
9.26
|
-4.86 |
-2.55 |
|
SYEPECPV |
11.29
|
-3.48 |
-1.17 |
|
RSYEPECP |
11.48
|
-0.98 |
1.33 |
| Q04322 |
TSPPLPPR |
4.98
|
-7.89 |
-5.58 |
|
TPPTLPPR |
5.54
|
-9.10 |
-6.79 |
|
APLDRPQL |
8.00
|
-6.62 |
-4.31 |
| Q12168 |
GPPPLPPR |
3.85
|
-9.23 |
-6.92 |
|
HPVPKPNI |
5.91
|
-6.36 |
-4.05 |
|
IPPPVPNR |
6.10
|
-7.94 |
-5.63 |
| P53169 |
IMPTLPPR |
6.10
|
-8.73 |
-6.42 |
|
MPTLPPRP |
8.64
|
-5.20 |
-2.89 |
|
NSVPIMPT |
8.89
|
-2.42 |
-0.11 |
| Q12344 |
SSPPLPPR |
4.96
|
-7.89 |
-5.58 |
|
TSPKLPPR |
6.35
|
-7.68 |
-5.37 |
|
SPPLPPRQ |
8.98
|
-6.17 |
-3.86 |
| Q07533 |
MNNPLPPL |
4.12
|
-5.81 |
-3.50 |
|
PLPPLPPL |
6.75
|
-8.14 |
-5.83 |
|
PHFPYGTW |
7.06
|
-3.59 |
-1.28 |
| P53238 |
AGRPIPPA |
7.04
|
-6.37 |
-4.06 |
|
GRPIPPAP |
7.72
|
-7.27 |
-4.96 |
|
KPAGRPIP |
9.26
|
-6.11 |
-3.80 |
| P08417 |
LPENEPGS |
11.73
|
-3.80 |
-1.49 |
|
LMLPENEP |
11.95
|
-4.20 |
-1.89 |
| P39521 |
QPKPKPAQ |
8.08
|
-5.88 |
-3.57 |
|
DAQPKPKP |
8.93
|
-6.95 |
-4.64 |
|
QTPHVPDR |
9.32
|
-4.37 |
-2.06 |
| P04050 |
PPPVRPSI |
6.31
|
-7.85 |
-5.54 |
|
LPVPPPPV |
7.71
|
-5.50 |
-3.19 |
|
GFSPTSPT |
8.21
|
-1.57 |
0.74 |
| P40453 |
IPPPLPPK |
4.02
|
-9.28 |
-6.97 |
|
KPPDLPIR |
5.79
|
-8.58 |
-6.27 |
|
KRPPPPPP |
6.07
|
-8.86 |
-6.55 |
| P19812 |
RPRRIPPT |
7.56
|
-7.43 |
-5.12 |
|
DHSPIFRP |
7.94
|
-4.50 |
-2.19 |
|
PQNPPPIL |
8.00
|
-4.62 |
-2.31 |
| Q03780 |
SRPPPPPM |
5.09
|
-7.99 |
-5.68 |
|
DIPPRSPN |
7.44
|
-1.41 |
0.90 |
|
PPPPPMDM |
7.51
|
-8.64 |
-6.33 |
| P48582 |
PAPPLPPL |
4.51
|
-7.96 |
-5.65 |
|
AAPPVPPK |
6.62
|
-7.56 |
-5.25 |
|
GGPPLLPQ |
6.65
|
-3.57 |
-1.26 |
| P53933 |
APPPLPNR |
4.35
|
-9.13 |
-6.82 |
|
RRPPPPPI |
5.27
|
-5.62 |
-3.31 |
|
RRRPPPPP |
6.44
|
-7.92 |
-5.61 |
| Q08229 |
YNPTIPPR |
6.62
|
-6.98 |
-4.67 |
|
TRPLPSTP |
9.30
|
-4.35 |
-2.04 |
|
LPTPVQPG |
9.41
|
-3.80 |
-1.49 |
| P33338 |
ARTPTPTP |
6.65
|
-5.02 |
-2.71 |
|
TPTPTPPV |
6.85
|
-4.67 |
-2.36 |
|
SGPLTPPT |
8.62
|
-5.19 |
-2.88 |
| P32893 |
GTIPNSPL |
10.48
|
-1.57 |
0.74 |
|
NGTIPNSP |
11.00
|
-0.46 |
1.85 |
| Q12446 |
FPFPIPEI |
4.49
|
-6.95 |
-4.64 |
|
APPPPPAF |
5.36
|
-8.15 |
-5.84 |
|
QFAPLPDP |
5.71
|
-5.73 |
-3.42 |
| P40483 |
SKPSVPPR |
5.53
|
-8.23 |
-5.92 |
|
APASKPSV |
8.35
|
-4.98 |
-2.67 |
|
KPSVPPRN |
10.68
|
-4.44 |
-2.13 |
| P39940 |
DDPRLPSS |
8.81
|
-6.30 |
-3.99 |
|
DPRLPSSL |
8.88
|
-2.96 |
-0.65 |
|
WDDPRLPS |
11.05
|
-2.77 |
-0.46 |
| P38266 |
MPPPKPFR |
5.45
|
-8.68 |
-6.37 |
|
QPPPKPFR |
5.46
|
-8.68 |
-6.37 |
|
LPPPKPFR |
5.48
|
-8.70 |
-6.39 |
| Q04659 |
DPTVPNGL |
10.02
|
-2.16 |
0.15 |
|
KDPTVPNG |
10.89
|
-5.65 |
-3.34 |
|
QKDPTVPN |
11.84
|
-4.55 |
-2.24 |
| P40563 |
APPPVPKK |
5.96
|
-8.06 |
-5.75 |
|
RRAPPPVP |
8.50
|
-5.97 |
-3.66 |
|
VTPKVPER |
9.20
|
-5.32 |
-3.01 |
| P00812 |
DPLYIPAT |
8.35
|
-5.55 |
-3.24 |
|
PHCPESLK |
8.81
|
-1.75 |
0.56 |
|
NKDVPHCP |
11.71
|
0.10 |
2.41 |
| Q04195 |
SHPSEPII |
6.07
|
-4.25 |
-1.94 |
|
STPVLPTL |
7.27
|
-5.79 |
-3.48 |
|
NEPIQFPF |
8.66
|
-5.24 |
-2.93 |
| P43582 |
PRPKGPPP |
8.47
|
-6.29 |
-3.98 |
|
WPRPKGPP |
8.71
|
-5.30 |
-2.99 |
|
TWPRPKGP |
9.06
|
-4.87 |
-2.56 |
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