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Matrix information:
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ADAN-name: LSB1_1CKA-28.PDB
Scoring matrix: LSB1_1CKA-28_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.21
Foldx random average score for Saccharomyces cerevisiae: 14.897 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
Total fragments: 3200363
Proteins after random average filtering: 7179
Total fragments: 1455985
Proteins after disorder filtering: 4356
Total fragments: 60809
Proteins after pattern filtering: 2118
Total fragments: 12240
Proteins after MINT filtering: 26
Total fragments: 375
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
18.21
|
0.36 |
0.00 |
| Best peptides |
RPPMYHMPFY |
0.00
|
-4.39 |
-4.75 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
KPLLPTRPNK |
8.31
|
-9.60 |
-9.96 |
|
KPTPPSPPAK |
9.60
|
-9.35 |
-9.71 |
|
FEKGPRMPSR |
10.18
|
-8.35 |
-8.71 |
| P53120 |
RSYEPECPVA |
11.61
|
-6.84 |
-7.20 |
| Q04322 |
TPPTLPPRRI |
12.76
|
-5.61 |
-5.97 |
|
SSTPPTLPPR |
12.87
|
-6.33 |
-6.69 |
|
ATPSKSPTSA |
13.89
|
-4.19 |
-4.55 |
| P19812 |
EPRPRRIPPT |
9.63
|
-7.76 |
-8.12 |
|
HSPIFRPGNI |
10.47
|
-5.42 |
-5.78 |
|
SPIFRPGNIF |
10.61
|
-7.77 |
-8.13 |
| P53169 |
VPIMPTLPPR |
9.78
|
-7.85 |
-8.21 |
|
ANSVPIMPTL |
12.03
|
-6.57 |
-6.93 |
|
YSPAQPSASL |
12.78
|
-4.37 |
-4.73 |
| Q12344 |
SPPLPPRQNV |
10.56
|
-6.23 |
-6.59 |
|
PPLPPRQNVA |
11.58
|
-8.39 |
-8.75 |
|
SPKLPPRGKQ |
11.66
|
-7.53 |
-7.89 |
| P00812 |
VDPLYIPATG |
9.12
|
-5.05 |
-5.41 |
|
KDVPHCPESL |
10.40
|
-5.75 |
-6.11 |
|
VPHCPESLKW |
12.25
|
-6.38 |
-6.74 |
| P53238 |
RPIPPAPTHY |
7.88
|
-8.90 |
-9.26 |
|
KPAGRPIPPA |
10.11
|
-7.50 |
-7.86 |
|
IPPAPTHYNN |
12.20
|
-6.72 |
-7.08 |
| P08417 |
LPENEPGSSI |
14.73
|
-3.64 |
-4.00 |
|
MLPENEPGSS |
14.75
|
-4.02 |
-4.38 |
|
PENEPGSSIM |
14.75
|
-6.06 |
-6.42 |
| P39521 |
HVPDRPPSQL |
10.57
|
-7.52 |
-7.88 |
|
PDRPPSQLSA |
11.85
|
-5.72 |
-6.08 |
|
VPDRPPSQLS |
13.20
|
-7.02 |
-7.38 |
| P04050 |
VPPPPVRPSI |
9.52
|
-6.83 |
-7.19 |
|
PPVRPSISFN |
10.48
|
-8.42 |
-8.78 |
|
GSPAYSPKQD |
11.99
|
-3.99 |
-4.35 |
| P40453 |
RPPPPPPVSM |
7.35
|
-8.83 |
-9.19 |
|
PPDLPIRLRK |
9.36
|
-9.23 |
-9.59 |
|
KPPDLPIRLR |
9.41
|
-9.50 |
-9.86 |
| Q12168 |
NDDPYFPQFR |
6.74
|
-6.28 |
-6.64 |
|
RGPPPLPPRA |
9.93
|
-6.58 |
-6.94 |
|
PPPLPPRANV |
10.00
|
-8.62 |
-8.98 |
| Q03780 |
RPPPPPMDMK |
4.97
|
-10.50 |
-10.86 |
|
PPPPMDMKSI |
8.80
|
-8.85 |
-9.21 |
|
RSRPPPPPMD |
9.41
|
-6.57 |
-6.93 |
| P48582 |
RNTPPQPSLL |
8.65
|
-7.52 |
-7.88 |
|
APPLPPLDSK |
9.32
|
-8.57 |
-8.93 |
|
MAAPPVPPKQ |
10.98
|
-6.29 |
-6.65 |
| P53933 |
RPPPPPIPST |
7.52
|
-8.25 |
-8.61 |
|
RVAPPPLPNR |
8.29
|
-9.81 |
-10.17 |
|
PPPPPIPSTQ |
11.63
|
-7.26 |
-7.62 |
| Q08229 |
NDYNPTIPPR |
12.04
|
-5.71 |
-6.07 |
|
RPLPSTPNED |
13.13
|
-5.95 |
-6.31 |
|
NPTIPPRSKD |
13.44
|
-6.93 |
-7.29 |
| P33338 |
RTPTPTPPVV |
10.95
|
-5.31 |
-5.67 |
|
RTPARTPTPT |
11.04
|
-5.26 |
-5.62 |
|
VTPARTPART |
11.18
|
-6.28 |
-6.64 |
| P43582 |
RPKGPPPGVN |
10.70
|
-7.30 |
-7.66 |
|
WPRPKGPPPG |
10.80
|
-7.45 |
-7.81 |
|
PRPKGPPPGV |
11.84
|
-5.11 |
-5.47 |
| P39940 |
WDDPRLPSSL |
7.73
|
-5.87 |
-6.23 |
|
TWDDPRLPSS |
14.87
|
-4.76 |
-5.12 |
| P38266 |
ITPPRPPPSR |
9.30
|
-7.97 |
-8.33 |
|
FQPPPKPFRR |
9.33
|
-7.48 |
-7.84 |
|
MPPPKPFRHG |
9.39
|
-7.84 |
-8.20 |
| P40483 |
KDAPASKPSV |
10.99
|
-4.29 |
-4.65 |
|
KPSVPPRNYF |
12.56
|
-8.37 |
-8.73 |
|
ASKPSVPPRN |
13.89
|
-3.92 |
-4.28 |
| P40563 |
RRAPPPVPKK |
8.08
|
-9.14 |
-9.50 |
|
KRRAPPPVPK |
11.53
|
-7.19 |
-7.55 |
|
VNPGQLPPSL |
12.78
|
-3.25 |
-3.61 |
| Q07533 |
LPPLPDLDNM |
8.48
|
-8.25 |
-8.61 |
|
LPPLPPLPDL |
9.49
|
-8.90 |
-9.26 |
|
VSSPKSPKAY |
10.17
|
-5.61 |
-5.97 |
| Q04195 |
HPSEPIIINL |
10.10
|
-8.04 |
-8.40 |
|
TPVLPTLPQN |
11.56
|
-7.32 |
-7.68 |
|
QNSTPVLPTL |
12.03
|
-6.65 |
-7.01 |
| Q12446 |
RPVPPPPPMR |
6.95
|
-8.60 |
-8.96 |
|
NPFPFPIPEI |
8.27
|
-8.30 |
-8.66 |
|
VPPPPPMRTT |
8.53
|
-9.03 |
-9.39 |
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