ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1SEM-4.PDB
Scoring matrix: HSE1_1SEM-4_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 13.95
Foldx random average score for Saccharomyces cerevisiae: 17.633

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7178
 Total fragments: 1693181
Proteins after disorder filtering: 4558
 Total fragments: 133219
Proteins after pattern filtering: 2316
 Total fragments: 24478
Proteins after MINT filtering: 29
 Total fragments: 721


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

13.95

10.17

0.00

Best peptides

ARPRPPRDPR

0.00

1.22

-8.95

         
Interactors      
Q06604

PTPPSPPAKR

7.01

-2.98

-13.15

RVKPAPPVSR

7.65

-5.05

-15.22

EKPLLPTRPN

8.44

-0.12

-10.29

Q06108

INMPIPKKLP

6.63

-3.66

-13.83

YTIRTPCKSP

7.70

-5.33

-15.50

PRSPYYINMP

9.52

-4.07

-14.24

P40073

QFDGYPQQQP

14.84

-0.40

-10.57

DGYPQQQPSH

16.61

0.69

-9.48

GYPQQQPSHT

17.51

-0.58

-10.75

P25604

PLPPKPKSPH

5.52

-3.37

-13.54

PLPPPPPPQP

6.49

-5.07

-15.24

PHLKPPLPPP

6.84

-6.07

-16.24

P40325

PTSSQPRPPP

6.51

-4.00

-14.17

PLYVQPGDPR

6.85

-3.06

-13.23

SQPRPPPRPQ

8.53

-1.83

-12.00

Q06412

ERRPPPPPPL

4.71

-3.60

-13.77

VKERRPPPPP

4.93

-6.25

-16.42

RRPPPPPPLL

6.26

-2.48

-12.65

Q66RC5

LIPDNPGRLL

11.16

-2.08

-12.25

ISNPSPLIPD

11.24

-1.41

-11.58

SISNPSPLIP

11.90

-2.19

-12.36

P36037

EDGKPPLKLP

11.43

1.75

-8.42

PPLKLPINVS

12.80

-2.49

-12.66

P40341

NIPPPPPPPP

6.34

-4.35

-14.52

IPPPPPPPPP

6.77

-5.95

-16.12

RNIPPPPPPP

6.89

-4.04

-14.21

P40343

HVELAPSDPP

8.34

-3.59

-13.76

LAPSDPPYPK

9.42

-4.17

-14.34

PQQPSPQPQP

10.45

-1.94

-12.11

P53238

AGRPIPPAPT

8.70

-2.31

-12.48

GRPIPPAPTH

8.98

0.15

-10.02

PIPPAPTHYN

11.28

-0.88

-11.05

P04051

SLPHFPKNSK

8.24

-0.90

-11.07

DRSLPHFPKN

11.48

-0.35

-10.52

PHFPKNSKTP

13.49

-3.16

-13.33

P48524

PPKRKPLLRP

10.19

-9.32

-19.49

PLLRPQRSDF

10.99

-2.43

-12.60

DSGFPPKRKP

11.10

-1.00

-11.17

P40453

RLRKRPPPPP

5.09

-6.21

-16.38

LRKRPPPPPP

5.19

-8.44

-18.61

IRLRKRPPPP

5.84

-7.04

-17.21

Q06697

GSSGGPRKDP

12.09

-1.79

-11.96

SSGGPRKDPI

12.81

-4.41

-14.58

P38753

AHISPPVPGP

8.28

-2.59

-12.76

EYSPYPSNLP

9.86

-0.99

-11.16

NTPVMPPQRQ

10.29

-0.95

-11.12

P38351

PVPQLPPKLL

8.94

-3.26

-13.43

VPQLPPKLLV

9.91

-2.30

-12.47

PKLLVYPESP

10.28

-1.78

-11.95

Q06524

YNPTVPNELL

9.77

-1.26

-11.43

TWKYNPTVPN

11.24

-1.63

-11.80

GTWKYNPTVP

14.02

-2.73

-12.90

P40020

VLPPLPFPLY

6.88

-4.96

-15.13

SRVLPPLPFP

8.74

-4.18

-14.35

EATSTPPAPT

9.28

-0.87

-11.04

P36041

ETSTPPPPPP

5.91

-1.76

-11.93

YMPPPPPPGF

8.13

-3.85

-14.02

LRPVIPRGPS

8.15

-3.26

-13.43

Q04439

ANIPPPPPPP

5.20

-4.09

-14.26

NIPPPPPPPP

6.34

-4.35

-14.52

IPPPPPPPPP

6.77

-5.95

-16.12

Q03497

FIPSRPAPKP

6.93

-2.03

-12.20

IPSRPAPKPP

8.80

-5.40

-15.57

HKQHKPKVKP

8.82

-1.51

-11.68

P40041

IPLSPPSSSN

12.00

-2.13

-12.30

PLSPPSSSNM

12.52

-1.40

-11.57

KIPLSPPSSS

12.87

-2.28

-12.45

Q03973

ENGPTHAPVP

10.20

-2.21

-12.38

SLENGPTHAP

11.95

-1.07

-11.24

GPTHAPVPIP

12.19

-2.72

-12.89

P10566

PIPAIPMDLP

6.90

-3.38

-13.55

STRPIPAIPM

10.27

-1.03

-11.20

TRPIPAIPMD

11.75

-2.27

-12.44

Q03935

INPPLPNGLP

7.93

-2.77

-12.94

PIHPSYIIPP

8.39

-3.51

-13.68

IQPPLPNLMH

8.94

-0.39

-10.56

O13527

PLPDLPPESP

7.60

-3.42

-13.59

PLNPKGKKLR

8.00

-5.66

-15.83

NVPLNPKGKK

8.88

-4.60

-14.77

P53901

AMRPIPPLPT

7.68

-4.00

-14.17

PIILPPTFSA

8.97

-1.40

-11.57

HNYNQPPLPP

8.98

-5.01

-15.18

Q12446

VRLPAPPPPP

4.25

-6.63

-16.80

RLPAPPPPPR

4.76

-1.64

-11.81

RRGPAPPPPP

5.65

-6.09

-16.26

 


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