ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1SEM-19.PDB
Scoring matrix: HSE1_1SEM-19_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.2
Foldx random average score for Saccharomyces cerevisiae: 16.171

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1553651
Proteins after disorder filtering: 4628
 Total fragments: 84867
Proteins after pattern filtering: 2147
 Total fragments: 9779
Proteins after MINT filtering: 29
 Total fragments: 263


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.20

0.04

0.00

Best peptides

IESRNGRRY

0.00

-1.61

-1.66

         
Interactors      
Q06604

PPSPPAKRI

7.26

-6.97

-7.01

GPRMPSRGR

10.56

-6.28

-6.33

PLLPTRPNK

11.80

-5.05

-5.09

Q06108

PRSPYYINM

11.39

-6.66

-6.71

TDPPPQPRR

11.93

-5.43

-5.47

IRTPCKSPY

12.44

-4.76

-4.80

P40073

DGYPQQQPS

15.95

-1.85

-1.90

P25604

PPKPNTQLQ

12.29

-5.05

-5.09

KPKSPHLKP

12.81

-6.39

-6.43

PPKPKSPHL

13.05

-6.33

-6.38

P40325

HQSRPHQRP

9.39

-9.01

-9.05

LYVQPGDPR

11.60

-3.41

-3.46

YVQPGDPRL

11.71

-4.86

-4.91

Q06412

PKSPRDSSK

11.90

-3.63

-3.67

PNSPKSPRD

12.48

-3.47

-3.52

GFSPNSPKS

12.68

-3.10

-3.15

Q66RC5

IPDNPGRLL

10.46

-2.79

-2.84

PLIPDNPGR

14.61

-2.89

-2.94

PDNPGRLLS

15.45

-3.95

-4.00

P36037

GKPPLKLPI

12.99

-5.59

-5.63

DGKPPLKLP

13.06

-5.45

-5.50

P40341

PPPPPKPPL

14.74

-7.14

-7.18

PKPPLNDPS

15.59

-1.62

-1.67

P40343

ELAPSDPPY

13.94

-4.02

-4.06

VELAPSDPP

14.93

-4.87

-4.92

PSDPPYPKE

15.48

-3.73

-3.77

P53238

PPAPTHYNN

13.68

-5.40

-5.45

RPIPPAPTH

13.97

-5.79

-5.84

P04051

RSLPHFPKN

13.75

-3.17

-3.21

PHFPKNSKT

14.54

-2.20

-2.25

LPHFPKNSK

15.34

-7.70

-7.75

P48524

KRKPLLRPQ

9.98

-5.30

-5.34

PKRKPLLRP

10.82

-6.31

-6.35

PLLRPQRSD

11.61

-4.51

-4.55

P40453

PDLPIRLRK

9.06

-5.42

-5.46

DCPRCGPTA

12.62

-2.87

-2.92

EIPPPLPPK

13.60

-5.83

-5.88

Q06697

SGGPRKDPI

14.67

-3.14

-3.19

P38753

PVMPPQRQS

11.61

-5.78

-5.83

SPPVPGPAL

14.29

-5.92

-5.96

PYPSNLPIQ

14.94

-2.51

-2.55

P38351

PQLPPKLLV

12.86

-4.85

-4.89

LPVPQLPPK

13.98

-5.84

-5.88

YPESPETNA

15.80

-2.66

-2.71

Q06524

PTVPNELLP

14.08

-5.97

-6.01

NPTVPNELL

15.76

-4.87

-4.92

P40020

EPTSPTRQV

11.28

-3.40

-3.44

PPLTPEKNL

13.71

-5.16

-5.21

PLTPEKNLY

13.72

-4.87

-4.92

P36041

PPYPNMMLQ

11.52

-4.79

-4.84

PIPPNGMLP

11.55

-6.54

-6.59

PPLPQGFPI

11.62

-5.89

-5.93

Q04439

APPPPGMQN

11.55

-5.45

-5.50

IPTPPQNRD

12.14

-4.80

-4.84

PSSKPKEPM

13.39

-5.09

-5.13

Q03497

IPSRPAPKP

11.24

-6.54

-6.59

PPIPPTKSK

11.74

-6.10

-6.14

KPSKPEAKS

11.74

-5.54

-5.59

P40041

PLSPPSSSN

13.50

-4.31

-4.35

Q03973

ENGPTHAPV

13.89

-2.51

-2.55

P10566

AIPMDLPDY

13.53

-3.18

-3.23

IPAIPMDLP

13.86

-6.44

-6.49

Q03935

PPLPNLMHL

11.57

-6.15

-6.20

HQSPIHPSY

11.66

-4.30

-4.34

PPLPNGLPN

11.90

-4.84

-4.88

O13527

PLNPKGKKL

10.03

-4.81

-4.85

MYFPPGPQS

10.95

-3.59

-3.63

KIHPRGIPG

12.22

-4.91

-4.96

P53901

PPIPTRDDM

12.59

-5.91

-5.96

LNSPKLPPL

13.62

-4.75

-4.79

PPLPTTSNS

13.75

-4.44

-4.49

Q12446

PPPPPHRHV

10.08

-7.61

-7.66

PPASPEVRK

10.42

-4.44

-4.49

PPPPRASRP

12.00

-8.02

-8.06

 


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