ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1SEM-17.PDB
Scoring matrix: HSE1_1SEM-17_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.46
Foldx random average score for Saccharomyces cerevisiae: 16.781

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1510689
Proteins after disorder filtering: 4676
 Total fragments: 103121
Proteins after pattern filtering: 2159
 Total fragments: 10260
Proteins after MINT filtering: 29
 Total fragments: 289


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

15.46

1.48

0.00

Best peptides

YNKMRGMSR

0.00

-1.39

-2.87

         
Interactors      
Q06604

EKGPRMPSR

9.23

-3.42

-4.89

FEKGPRMPS

10.90

-2.46

-3.94

EEKPLLPTR

11.72

-4.18

-5.65

Q06108

PPQPRRLSD

8.85

-2.51

-3.98

QPATPGSTR

9.34

-3.62

-5.10

DPRSPYYIN

12.95

-1.67

-3.15

P40073

GYPQQQPSH

12.04

-1.77

-3.25

DGYPQQQPS

13.95

-0.14

-1.62

P25604

PPKPNTQLQ

12.18

-2.71

-4.19

KPKSPHLKP

12.84

-6.69

-8.17

LPPKPKSPH

13.00

-5.19

-6.67

P40325

LYVQPGDPR

10.86

-2.43

-3.91

QSQPPRPPR

11.95

-4.25

-5.72

PSTMPATSS

12.14

-2.57

-4.04

Q06412

SPKSPRDSS

10.55

-1.66

-3.13

PPPPLSTSR

10.82

-4.31

-5.79

KPPPPLSTS

12.06

-4.14

-5.62

Q66RC5

PDNPGRLLS

14.06

-1.38

-2.86

SNPSPLIPD

15.99

0.50

-0.98

PLIPDNPGR

16.21

-0.23

-1.71

P36037

KPPLKLPIN

13.78

-5.05

-6.53

GKPPLKLPI

13.95

-2.97

-4.45

P40341

KPPLNDPSN

11.00

-2.44

-3.92

PKPPLNDPS

15.66

-1.28

-2.75

PPPPPKPPL

15.84

-5.97

-7.45

P40343

PQPQPIHSV

12.70

-2.12

-3.60

PSPQPQPIH

14.04

-2.62

-4.10

ELAPSDPPY

15.11

-0.50

-1.98

P53238

RPIPPAPTH

9.80

-5.38

-6.86

IPPAPTHYN

14.70

-2.82

-4.29

PPAPTHYNN

15.51

-3.64

-5.12

P04051

RSLPHFPKN

10.87

-2.97

-4.45

PAMLPGSSN

12.76

-1.83

-3.31

SVNPAMLPG

14.19

-0.96

-2.44

P48524

PLLRPQRSD

11.88

-3.25

-4.72

KRKPLLRPQ

12.69

-2.41

-3.89

FPPKRKPLL

13.15

-5.04

-6.52

P40453

WKPPDLPIR

11.59

-2.05

-3.52

PDLPIRLRK

13.69

-2.54

-4.02

SWKPPDLPI

13.70

-3.08

-4.55

Q06697

SGGPRKDPI

16.19

-2.97

-4.45

P38753

PYPSNLPIQ

12.31

-0.82

-2.29

NLPIQHPTN

13.42

-2.01

-3.48

SPPVPGPAL

13.71

-2.62

-4.10

P38351

PQLPPKLLV

12.46

-3.93

-5.41

LPVPQLPPK

14.94

-4.30

-5.78

YPESPETNA

15.87

-4.76

-6.23

Q06524

WKYNPTVPN

14.93

-0.33

-1.81

PTVPNELLP

16.62

-3.51

-4.98

P40020

CVNPHSIPF

12.11

-1.54

-3.02

PSIPVEHSN

12.29

-0.40

-1.88

YLTPESPLN

12.60

-1.49

-2.96

P36041

PVIPRGPSS

8.05

-1.94

-3.42

PPPPPGLIA

11.02

-4.43

-5.90

MPPPPGLVQ

11.43

-4.96

-6.44

Q04439

APPPPGMQN

10.07

-3.13

-4.61

RPSPPTAAT

13.53

-3.64

-5.12

PSPPTAATR

14.04

-1.04

-2.52

Q03497

KFIPSRPAP

12.90

-4.66

-6.13

PPIPPTKSK

12.96

-3.87

-5.35

LPGSPQVST

13.49

-2.19

-3.67

P40041

PLSPPSSSN

11.54

-0.83

-2.31

Q03973

ENGPTHAPV

14.27

-1.53

-3.00

P10566

RPIPAIPMD

14.19

-3.21

-4.69

PAIPMDLPD

14.54

0.20

-1.28

Q03935

PPLPNGLPN

8.36

-2.34

-3.81

HQSPIHPSY

11.18

-3.15

-4.63

PPLPNLMHL

13.37

-3.27

-4.75

O13527

KIHPRGIPG

9.92

-3.64

-5.12

MYFPPGPQS

11.90

-2.96

-4.44

SQFPQYPSS

12.18

-0.15

-1.63

P53901

PNSHPHPSG

10.81

-3.55

-5.03

RPIPPLPTE

11.36

-3.93

-5.41

PPLPPIPTR

11.41

-4.64

-6.12

Q12446

PPPPPRASR

9.19

-5.44

-6.92

RPLPQLPNR

11.47

-4.78

-6.26

PEIPSTQSA

11.83

-0.31

-1.79

 


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