ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1OEB-8.PDB
Scoring matrix: HSE1_1OEB-8_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.47
Foldx random average score for Saccharomyces cerevisiae: 10.553

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1569866
Proteins after disorder filtering: 4679
 Total fragments: 96735
Proteins after pattern filtering: 2287
 Total fragments: 16824
Proteins after MINT filtering: 29
 Total fragments: 598


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

12.47

-0.31

0.00

Best peptides

DWPPRQHR

0.00

0.51

0.82

         
Interactors      
Q06604

SPPPLPTR

2.23

-8.03

-7.72

EKPLLPTR

3.40

-6.11

-5.80

KGPRMPSR

3.79

-7.35

-7.04

Q06108

DPPPQPRR

2.84

-7.43

-7.12

TDPPPQPR

5.30

-4.23

-3.92

KTDPRSPY

6.38

-2.51

-2.20

P40073

YPQQQPSH

8.27

-5.03

-4.72

GYPQQQPS

9.26

-2.90

-2.59

DGYPQQQP

10.22

-4.35

-4.04

P25604

QAPSLPPK

4.98

-6.96

-6.65

NTPPLPPK

5.13

-4.64

-4.33

LKPPLPPP

5.33

-7.35

-7.04

P40325

SQPPRPPR

1.30

-8.74

-8.43

RPPPRPQQ

4.05

-7.31

-7.00

SQPRPPPR

4.25

-4.72

-4.41

Q06412

RPPPPPPL

5.19

-6.53

-6.22

PPPPPPLL

5.68

-6.20

-5.89

RRPPPPPP

6.36

-5.60

-5.29

Q66RC5

LIPDNPGR

6.16

-3.64

-3.33

PSPLIPDN

7.57

-3.68

-3.37

PLIPDNPG

8.71

-3.07

-2.76

P36037

KPPLKLPI

6.69

-5.92

-5.61

GKPPLKLP

6.72

-6.36

-6.05

PPLKLPIN

7.09

-6.38

-6.07

P40341

PPPPKPPL

4.46

-7.62

-7.31

PPPPPPPK

5.24

-7.38

-7.07

IPPPPPPP

6.41

-6.55

-6.24

P40343

LAPSDPPY

5.84

-4.42

-4.11

QQPSPQPQ

6.97

-2.56

-2.25

PSPQPQPI

7.22

-2.43

-2.12

P53238

KPAGRPIP

7.03

-6.97

-6.66

IPPAPTHY

7.12

-4.14

-3.83

GRPIPPAP

7.13

-3.23

-2.92

P04051

RSLPHFPK

7.08

-5.45

-5.14

SLPHFPKN

7.74

-3.30

-2.99

NPAMLPGS

8.38

-5.58

-5.27

P48524

KPLLRPQR

3.12

-8.02

-7.71

FPPKRKPL

3.86

-6.00

-5.69

RKPLLRPQ

5.93

-6.13

-5.82

P40453

KPPDLPIR

2.52

-7.75

-7.44

IPPPLPPK

3.32

-8.36

-8.05

PDLPIRLR

6.27

-6.43

-6.12

Q06697

GGPRKDPI

9.43

-3.83

-3.52

SGGPRKDP

10.11

-3.51

-3.20

P38753

TPVMPPQR

5.50

-6.42

-6.11

NTPVMPPQ

6.60

-4.05

-3.74

ISPPVPGP

6.60

-5.36

-5.05

P38351

SLPVPQLP

7.59

-3.08

-2.77

PVPQLPPK

7.80

-5.54

-5.23

VPQLPPKL

7.87

-6.19

-5.88

Q06524

NPTVPNEL

8.65

-4.44

-4.13

YNPTVPNE

8.81

-3.75

-3.44

PTVPNELL

9.17

-1.70

-1.39

P40020

EEPTSPTR

4.69

-4.86

-4.55

PPPLTPEK

4.89

-6.42

-6.11

VLPPLPFP

5.27

-6.54

-6.23

P36041

VPPNFPQR

4.43

-6.03

-5.72

PPPPPPGF

4.89

-6.87

-6.56

MPPLPQGF

5.16

-5.11

-4.80

Q04439

IPTPPQNR

5.05

-6.09

-5.78

SKPKEPMF

5.57

-4.43

-4.12

IPPPPPPP

6.41

-6.55

-6.24

Q03497

HAPTTPNR

4.42

-5.92

-5.61

EEQPLPPI

5.64

-7.46

-7.15

KPKVKPSK

6.21

-7.56

-7.25

P40041

GRTLPPVP

8.82

-5.47

-5.16

IPLSPPSS

9.27

-4.69

-4.38

Q03973

GPTHAPVP

8.91

-4.62

-4.31

THAPVPIP

9.54

-5.17

-4.86

P10566

IPMDLPDY

5.84

-6.79

-6.48

RPIPAIPM

8.64

-4.79

-4.48

TRPIPAIP

8.80

-3.31

-3.00

Q03935

IQPPLPNL

4.44

-6.38

-6.07

QSPIHPSY

6.42

-2.60

-2.29

SNPIQPPL

6.91

-2.86

-2.55

O13527

PLPDLPPE

6.41

-4.52

-4.21

FPPGPQSQ

6.89

-3.99

-3.68

LNVPLNPK

6.92

-6.52

-6.21

P53901

PLPPIPTR

3.35

-5.41

-5.10

NQPPLPPI

4.75

-5.82

-5.51

NSPKLPPL

4.81

-4.05

-3.74

Q12446

PPPPRASR

2.25

-7.64

-7.33

APPPPPHR

3.27

-8.40

-8.09

PLPQLPNR

3.37

-5.89

-5.58

 


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