ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1OEB-27.PDB
Scoring matrix: HSE1_1OEB-27_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 13.23
Foldx random average score for Saccharomyces cerevisiae: 13.617

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1436698
Proteins after disorder filtering: 4684
 Total fragments: 106275
Proteins after pattern filtering: 2307
 Total fragments: 19728
Proteins after MINT filtering: 29
 Total fragments: 657


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAAA

13.23

-2.52

0.00

Best peptides

YRRPDPRRR

0.00

-4.67

-2.15

         
Interactors      
Q06604

KPAPPVSRS

5.51

-7.70

-5.18

KGPRMPSRG

6.05

-7.45

-4.93

KNKPKPTPP

6.31

-5.60

-3.08

Q06108

DPPPQPRRL

6.17

-5.63

-3.11

TDPPPQPRR

6.37

-7.56

-5.04

IRTPCKSPY

7.57

-4.27

-1.75

P40073

DGYPQQQPS

9.56

-4.64

-2.12

FDGYPQQQP

11.58

-5.09

-2.57

YPQQQPSHT

13.02

-4.80

-2.28

P25604

HLKPPLPPP

7.12

-5.63

-3.11

QNTPPLPPK

7.16

-5.16

-2.64

PPPPPPQPA

7.20

-5.22

-2.70

P40325

QPRPPPRPQ

4.85

-6.52

-4.00

RPPPRPQQN

5.63

-7.82

-5.30

QSRPHQRPS

5.86

-4.04

-1.52

Q06412

RRPPPPPPL

5.29

-8.09

-5.57

RPPPPPPLL

6.46

-8.32

-5.80

FTKPPPPLS

6.74

-6.40

-3.88

Q66RC5

SNPSPLIPD

9.22

-4.79

-2.27

ISNPSPLIP

9.43

-5.41

-2.89

IPDNPGRLL

9.92

-7.56

-5.04

P36037

DGKPPLKLP

8.18

-6.35

-3.83

GKPPLKLPI

10.74

-5.17

-2.65

KPPLKLPIN

11.55

-6.76

-4.24

P40341

RNIPPPPPP

6.01

-8.46

-5.94

IPPPPPPPP

6.07

-6.21

-3.69

PPPPPPKPP

7.24

-5.98

-3.46

P40343

QPSPQPQPI

7.33

-5.80

-3.28

PQQPSPQPQ

8.85

-3.94

-1.42

SDPPYPKEE

9.14

-4.90

-2.38

P53238

KPAGRPIPP

8.60

-5.27

-2.75

AGRPIPPAP

8.74

-5.37

-2.85

RPIPPAPTH

8.93

-4.49

-1.97

P04051

RSLPHFPKN

7.13

-5.57

-3.05

PHFPKNSKT

10.62

-4.05

-1.53

VNPAMLPGS

11.00

-5.76

-3.24

P48524

KRKPLLRPQ

5.27

-8.52

-6.00

SGFPPKRKP

6.44

-4.54

-2.02

GFPPKRKPL

8.14

-5.43

-2.91

P40453

WKPPDLPIR

4.70

-8.51

-5.99

RKRPPPPPP

4.99

-7.41

-4.89

KRPPPPPPV

5.72

-8.65

-6.13

Q06697

SGGPRKDPI

9.59

-4.85

-2.33

SSGGPRKDP

12.44

-4.55

-2.03

P38753

ISPPVPGPA

8.57

-5.75

-3.23

NNTPVMPPQ

9.06

-4.55

-2.03

YPSNLPIQH

9.24

-6.30

-3.78

P38351

LPVPQLPPK

8.44

-6.20

-3.68

YPESPETNA

10.17

-5.66

-3.14

LVYPESPET

11.15

-5.32

-2.80

Q06524

WKYNPTVPN

8.97

-7.85

-5.33

KYNPTVPNE

11.00

-4.03

-1.51

PTVPNELLP

12.25

-3.49

-0.97

P40020

YLTPESPLN

7.41

-6.47

-3.95

RVLPPLPFP

7.99

-7.84

-5.32

DRPPPLTPE

8.19

-3.88

-1.36

P36041

YMPPPPPPG

5.01

-7.73

-5.21

MGVPPNFPQ

6.46

-5.72

-3.20

SNSPMPIPS

6.94

-5.48

-2.96

Q04439

IPPPPPPPP

6.07

-6.21

-3.69

IPTPPQNRD

6.41

-5.03

-2.51

KKPAPPPPG

7.44

-7.82

-5.30

Q03497

QPLPPIPPT

7.80

-5.73

-3.21

QHKPKVKPS

7.85

-6.24

-3.72

PSRPAPKPP

8.23

-4.80

-2.28

P40041

PLSPPSSSN

11.15

-3.18

-0.66

IPLSPPSSS

11.56

-5.98

-3.46

Q03973

ENGPTHAPV

10.88

-4.35

-1.83

PTHAPVPIP

11.55

-5.82

-3.30

GPTHAPVPI

11.96

-4.71

-2.19

P10566

RPIPAIPMD

8.31

-5.87

-3.35

STRPIPAIP

9.15

-5.56

-3.04

PAIPMDLPD

11.28

-5.09

-2.57

Q03935

NSNPIQPPL

8.97

-4.64

-2.12

IQPPLPNLM

9.17

-6.35

-3.83

PPLPNLMHL

9.44

-2.27

0.25

O13527

YGHPSMIPY

4.44

-5.76

-3.24

KIHPRGIPG

6.75

-6.39

-3.87

LPLPDLPPE

7.33

-6.68

-4.16

P53901

YNQPPLPPI

5.32

-6.47

-3.95

PLPPIPTRD

7.23

-5.69

-3.17

LNSPKLPPL

7.54

-6.72

-4.20

Q12446

APPPPPRRG

4.08

-9.00

-6.48

VPPPPPMRT

4.27

-7.78

-5.26

MSSPPPPPV

5.63

-6.61

-4.09

 


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