ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1OEB-17.PDB
Scoring matrix: HSE1_1OEB-17_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.1
Foldx random average score for Saccharomyces cerevisiae: 18.778

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1628216
Proteins after disorder filtering: 4641
 Total fragments: 91692
Proteins after pattern filtering: 2086
 Total fragments: 8676
Proteins after MINT filtering: 28
 Total fragments: 251


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

15.10

1.89

0.00

Best peptides

YPFVRGRAR

0.00

-4.11

-6.00

         
Interactors      
Q06604

GPRMPSRGR

9.71

-6.11

-8.00

EKGPRMPSR

11.37

-3.75

-5.64

LPTRPNKAE

12.83

-3.85

-5.74

Q06108

QPATPGSTR

9.62

-5.72

-7.61

TDPPPQPRR

13.19

-6.45

-8.34

KTDPRSPYY

13.85

-2.73

-4.62

P40073

GYPQQQPSH

16.47

-2.56

-4.45

P25604

PPPPPQPAS

13.32

-2.12

-4.01

LPPKPKSPH

13.62

-5.23

-7.12

LPPKPNTQL

14.04

-5.86

-7.75

P40325

PPRPPRPAA

12.25

-3.09

-4.98

LYVQPGDPR

12.70

-3.15

-5.04

YVQPGDPRL

12.83

-3.89

-5.78

Q06412

PPPPLSTSR

12.54

-5.28

-7.17

PKLPPLNTR

14.50

-3.18

-5.07

PKSPRDSSK

14.57

-2.73

-4.62

Q66RC5

IPDNPGRLL

11.46

-4.45

-6.34

PLIPDNPGR

15.42

-2.80

-4.69

P36037

GKPPLKLPI

17.48

-1.79

-3.68

KPPLKLPIN

18.25

-3.51

-5.40

P40341

KPPLNDPSN

14.63

-4.71

-6.60

PPPPPKPPL

15.00

-6.09

-7.98

P40343

PSDPPYPKE

17.07

-0.86

-2.75

ELAPSDPPY

17.64

-0.79

-2.68

PQPQPIHSV

18.09

-1.32

-3.21

P53238

RPIPPAPTH

13.39

-5.48

-7.37

IPPAPTHYN

16.48

-3.28

-5.17

PPAPTHYNN

16.95

-2.73

-4.62

P04051

LPHFPKNSK

12.15

-6.36

-8.25

RSLPHFPKN

17.04

-1.65

-3.54

PAMLPGSSN

17.34

-2.76

-4.65

P48524

FPPKRKPLL

9.64

-6.29

-8.18

PLLRPQRSD

12.91

-2.55

-4.44

RKPLLRPQR

14.54

-6.97

-8.86

P40453

PPDLPIRLR

14.31

-4.64

-6.53

PDLPIRLRK

14.37

-4.16

-6.05

WKPPDLPIR

15.14

-3.06

-4.95

Q06697

SGGPRKDPI

18.57

-1.11

-3.00

P38753

SPPVPGPAL

8.67

-5.10

-6.99

PVMPPQRQS

15.47

-2.33

-4.22

PIQHPTNSA

16.75

-0.86

-2.75

P38351

YPESPETNA

14.87

-2.77

-4.66

LPVPQLPPK

16.30

-5.56

-7.45

LVYPESPET

18.57

0.89

-1.00

Q06524

NPTVPNELL

15.03

-3.86

-5.75

KYNPTVPNE

17.65

-0.96

-2.85

P40020

PAPTSAPSI

14.21

-1.30

-3.19

LYLTPESPL

15.32

-1.87

-3.76

PPLTPEKNL

15.35

-3.49

-5.38

P36041

PVIPRGPSS

11.96

-2.18

-4.07

PPNFPQRMM

12.00

-5.41

-7.30

GIPVGQPSL

12.65

-4.53

-6.42

Q04439

RPSPPTAAT

13.10

-2.68

-4.57

APPPPGMQN

14.73

-2.74

-4.63

PPPSSKPKE

15.17

-2.45

-4.34

Q03497

HKPKVKPSK

12.90

-3.09

-4.98

LPGSPQVST

13.82

-1.77

-3.66

PPIPPTKSK

13.83

-4.81

-6.70

P40041

PLSPPSSSN

16.37

-2.56

-4.45

P10566

RPIPAIPMD

16.37

-1.89

-3.78

AIPMDLPDY

17.84

-2.04

-3.93

Q03935

HQSPIHPSY

13.32

-2.34

-4.23

PPLPNLMHL

14.64

-3.51

-5.40

PPLPNGLPN

15.20

-3.23

-5.12

O13527

PLNPKGKKL

13.62

-3.65

-5.54

MYFPPGPQS

13.80

-2.17

-4.06

VPENPHHAS

13.86

-1.68

-3.57

P53901

PPLPPIPTR

13.08

-5.27

-7.16

YNQPPLPPI

14.21

-4.22

-6.11

RPIPPLPTE

14.26

-4.38

-6.27

Q12446

PPPPPRASR

10.12

-7.51

-9.40

APTTPAPAL

11.09

-3.28

-5.17

RPLPQLPNR

12.91

-6.02

-7.91

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER