ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1GCQ-20.PDB
Scoring matrix: HSE1_1GCQ-20_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 13.55
Foldx random average score for Saccharomyces cerevisiae: 14.445

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1663951
Proteins after disorder filtering: 4611
 Total fragments: 94000
Proteins after pattern filtering: 2007
 Total fragments: 7224
Proteins after MINT filtering: 27
 Total fragments: 201


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

13.55

-1.36

0.00

Best peptides

FPPFRGFSM

0.00

-6.55

-5.19

         
Interactors      
Q06604

EKGPRMPSR

8.65

-5.42

-4.06

LPTRPNKAE

10.74

-8.64

-7.28

EEKPLLPTR

11.52

-5.61

-4.25

Q06108

KTDPRSPYY

9.25

-6.64

-5.28

PPQPRRLSD

10.18

-5.45

-4.09

RTPCKSPYS

10.65

-4.64

-3.28

P40073

GYPQQQPSH

10.23

-4.00

-2.64

P25604

PPKPKSPHL

8.87

-7.76

-6.40

LPPKPNTQL

9.44

-9.25

-7.89

KSPHLKPPL

10.78

-6.85

-5.49

P40325

YVQPGDPRL

8.22

-10.64

-9.28

PRPQQNPSL

8.29

-6.43

-5.07

RPPRPAANL

9.77

-10.70

-9.34

Q06412

PPPPLSTSR

8.88

-5.37

-4.01

PKSPRDSSK

9.57

-4.13

-2.77

PNSPKSPRD

11.83

-5.95

-4.59

Q66RC5

IPDNPGRLL

8.55

-7.13

-5.77

PDNPGRLLS

13.32

-3.43

-2.07

PLIPDNPGR

13.34

-4.06

-2.70

P36037

GKPPLKLPI

14.42

-5.80

-4.44

P40341

KPPLNDPSN

10.60

-5.80

-4.44

PPPPPKPPL

13.20

-8.85

-7.49

P40343

ELAPSDPPY

14.02

-5.57

-4.21

P53238

RPIPPAPTH

11.75

-6.38

-5.02

PPAPTHYNN

11.93

-5.65

-4.29

IPPAPTHYN

13.57

-5.62

-4.26

P04051

LPHFPKNSK

9.07

-5.35

-3.99

RSLPHFPKN

10.87

-4.14

-2.78

PAMLPGSSN

13.50

-3.30

-1.94

P48524

FPPKRKPLL

5.65

-9.25

-7.89

GFPPKRKPL

11.17

-6.17

-4.81

PLLRPQRSD

11.49

-5.77

-4.41

P40453

PDLPIRLRK

9.83

-7.55

-6.19

DCPRCGPTA

9.89

-6.69

-5.33

PPPVSMPTT

13.69

-5.26

-3.90

P38753

SPPVPGPAL

8.76

-8.26

-6.90

NLPIQHPTN

10.85

-5.74

-4.38

SPYPSNLPI

13.89

-5.55

-4.19

P38351

LPVPQLPPK

10.69

-7.43

-6.07

Q06524

NPTVPNELL

10.85

-7.23

-5.87

P40020

PSIPVEHSN

11.14

-3.19

-1.83

YLTPESPLN

11.31

-4.00

-2.64

CVNPHSIPF

11.51

-3.92

-2.56

P36041

PVIPRGPSS

7.90

-3.72

-2.36

GIPVGQPSL

8.07

-6.55

-5.19

PPNFPQRMM

9.15

-7.50

-6.14

Q03935

HQSPIHPSY

8.85

-4.09

-2.73

PPLPNLMHL

9.05

-8.28

-6.92

PPLPNGLPN

10.61

-5.48

-4.12

Q03497

HKPKVKPSK

8.16

-6.61

-5.25

PSKPEAKSK

9.79

-4.24

-2.88

PPIPPTKSK

10.42

-6.43

-5.07

P40041

PLSPPSSSN

12.51

-4.30

-2.94

P10566

TRPIPAIPM

12.41

-6.06

-4.70

RPIPAIPMD

13.11

-5.24

-3.88

Q04439

APPPPGMQN

10.42

-6.26

-4.90

SSKPKEPMF

11.10

-7.03

-5.67

PPPPSSKPK

11.14

-5.00

-3.64

O13527

PLNPKGKKL

6.83

-7.83

-6.47

KIHPRGIPG

9.80

-5.14

-3.78

PRGIPGYAL

10.36

-7.03

-5.67

P53901

LNSPKLPPL

10.54

-6.93

-5.57

SSSPNSHPH

12.58

-3.36

-2.00

RPIPPLPTE

12.63

-6.46

-5.10

Q12446

QIPQSAPSA

10.27

-3.35

-1.99

RPLPQLPNR

10.32

-6.84

-5.48

PPPPPRASR

10.93

-8.09

-6.73

 


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