ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: HSE1_1GCQ-17.PDB
Scoring matrix: HSE1_1GCQ-17_mat
Uniprot code: P38753
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.55
Foldx random average score for Saccharomyces cerevisiae: 16.477

Available information for P38753 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 49
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1563317
Proteins after disorder filtering: 4597
 Total fragments: 80743
Proteins after pattern filtering: 2067
 Total fragments: 8255
Proteins after MINT filtering: 26
 Total fragments: 243


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.55

-2.03

0.00

Best peptides

FPKMNGYRL

0.00

-10.54

-8.51

         
Interactors      
Q06604

LPTRPNKAE

11.29

-9.65

-7.62

GPRMPSRGR

11.73

-7.10

-5.07

EKGPRMPSR

11.84

-4.96

-2.93

Q06108

QPATPGSTR

9.24

-4.53

-2.50

TDPPPQPRR

11.04

-7.97

-5.94

KTDPRSPYY

12.13

-4.51

-2.48

P40073

GYPQQQPSH

13.55

-3.63

-1.60

P25604

LPPKPNTQL

10.99

-9.26

-7.23

PPKPNTQLQ

11.20

-4.99

-2.96

PPKPKSPHL

11.58

-6.55

-4.52

P40325

YVQPGDPRL

9.29

-9.27

-7.24

RPPRPAANL

10.84

-8.56

-6.53

LYVQPGDPR

12.29

-4.29

-2.26

Q06412

PPPPLSTSR

11.33

-5.22

-3.19

PKSPRDSSK

12.27

-3.54

-1.51

PPPPLLYST

13.06

-4.11

-2.08

Q66RC5

IPDNPGRLL

10.87

-6.42

-4.39

PDNPGRLLS

15.73

-3.44

-1.41

NPSPLIPDN

16.02

-1.93

0.10

P40341

KPPLNDPSN

11.57

-6.91

-4.88

PPPPPKPPL

13.13

-7.78

-5.75

P40343

PQPQPIHSV

14.21

-3.99

-1.96

PSDPPYPKE

15.46

-3.56

-1.53

ELAPSDPPY

16.38

-5.17

-3.14

P53238

RPIPPAPTH

11.91

-5.43

-3.40

PPAPTHYNN

14.24

-4.73

-2.70

IPPAPTHYN

14.82

-6.57

-4.54

P04051

LPHFPKNSK

10.64

-7.09

-5.06

RSLPHFPKN

14.18

-4.02

-1.99

PAMLPGSSN

14.80

-5.05

-3.02

P48524

FPPKRKPLL

7.87

-7.97

-5.94

PLLRPQRSD

12.36

-5.18

-3.15

KRKPLLRPQ

13.07

-3.49

-1.46

P40453

PDLPIRLRK

10.78

-6.44

-4.41

DCPRCGPTA

12.12

-4.15

-2.12

PPDLPIRLR

14.13

-6.50

-4.47

P38753

SPPVPGPAL

10.64

-6.91

-4.88

NLPIQHPTN

12.72

-5.67

-3.64

PIQHPTNSA

14.17

-3.47

-1.44

P38351

LPVPQLPPK

11.94

-5.90

-3.87

YPESPETNA

15.34

-4.58

-2.55

PQLPPKLLV

15.74

-4.53

-2.50

Q06524

NPTVPNELL

12.56

-5.94

-3.91

P40020

PPLTPEKNL

11.64

-5.98

-3.95

LPPLPFPLY

12.35

-8.54

-6.51

LYLTPESPL

12.84

-3.89

-1.86

P36041

PPYPNMMLQ

10.16

-4.90

-2.87

PVIPRGPSS

10.61

-4.73

-2.70

FPIPPNGML

10.83

-8.93

-6.90

Q03935

PPLPNLMHL

9.39

-7.83

-5.80

HQSPIHPSY

10.58

-5.62

-3.59

PPLPNGLPN

11.39

-5.92

-3.89

Q03497

PPIPPTKSK

10.09

-5.94

-3.91

HKPKVKPSK

11.09

-4.63

-2.60

PSKPEAKSK

12.42

-3.26

-1.23

P40041

PLSPPSSSN

14.32

-3.81

-1.78

P10566

TRPIPAIPM

14.09

-4.95

-2.92

RPIPAIPMD

14.52

-4.27

-2.24

AIPMDLPDY

15.00

-3.47

-1.44

Q04439

APPPPGMQN

11.66

-5.56

-3.53

IPTPPQNRD

13.68

-7.71

-5.68

NNNIPTPPQ

13.74

-2.78

-0.75

O13527

PRGIPGYAL

10.05

-5.32

-3.29

PLNPKGKKL

10.14

-6.34

-4.31

MYFPPGPQS

12.08

-3.38

-1.35

P53901

MAMRPIPPL

12.18

-7.81

-5.78

RPIPPLPTE

12.26

-5.80

-3.77

PPLPPIPTR

12.29

-5.13

-3.10

Q12446

PPPPPRASR

10.66

-6.97

-4.94

RPLPQLPNR

11.96

-7.40

-5.37

APTTPAPAL

12.02

-5.28

-3.25

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER