ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: FUS1_1PWT-18.PDB
Scoring matrix: FUS1_1PWT-18_mat
Uniprot code: P11710
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 17.43
Foldx random average score for Saccharomyces cerevisiae: 16.935

Available information for P11710 in MINT (Nov 2008):
Nš of interacting proteins: 37
 Proteins belonging to other specie: 0
Nš of interactions described: 47
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1455208
Proteins after disorder filtering: 4513
 Total fragments: 80714
Proteins after pattern filtering: 2009
 Total fragments: 8844
Proteins after MINT filtering: 20
 Total fragments: 114


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

17.43

4.09

0.00

Best peptides

RRPFRSRWKR

0.00

-1.37

-5.46

         
Interactors      
P11710

PLPLTPNSKY

9.68

-3.12

-7.21

LPLTPNSKYN

13.39

-5.31

-9.40

KPLPLTPNSK

15.11

-0.24

-4.33

Q12280

TPPLRPQSSS

12.84

-2.05

-6.14

PLRPQSSSKI

13.32

0.41

-3.68

SPSKPGNNNS

13.74

-1.10

-5.19

P36119

RPTVQPSNQS

14.08

-3.30

-7.39

TRPTVQPSNQ

15.48

-2.72

-6.81

PTVQPSNQST

15.69

0.84

-3.25

P40073

GYPQQQPSHT

16.93

-0.96

-5.05

P24583

APLPPQPRKH

12.93

-1.36

-5.45

NAPLPPQPRK

14.34

-4.03

-8.12

PPQPRKHDKT

15.05

-0.73

-4.82

P39732

HPSIAPPSKL

9.98

-2.13

-6.22

RSPSVSPVRT

12.05

-0.92

-5.01

SSPSPSPTSS

15.09

2.19

-1.90

P21268

PISPPPSLKK

14.05

-0.88

-4.97

SKPISPPPSL

14.79

-2.54

-6.63

KPISPPPSLK

16.78

-0.54

-4.63

P40091

DPSSPSSVGS

11.59

-1.93

-6.02

NPSHPHHNSR

13.42

-1.67

-5.76

SSPASSPVTW

16.41

4.95

0.86

P40450

SPKLFPRLSS

11.17

-2.80

-6.89

PPPLPDLFKT

11.31

-1.91

-6.00

PPPLPESLSM

13.72

-3.07

-7.16

P32917

YSPLLPPFGL

10.41

-2.25

-6.34

LPQHPHRTSS

12.25

-2.87

-6.96

YLPQHPHRTS

16.65

2.50

-1.59

P25376

RPSSQPHLGY

8.44

-3.03

-7.12

SNDRPSSQPH

16.54

-2.40

-6.49

P40020

PPYLSPQNKD

10.69

-2.31

-6.40

LPPLPFPLYD

12.00

-4.81

-8.90

LPPYLSPQNK

12.15

-0.92

-5.01

P41832

PPPLPSVLSS

11.98

-2.23

-6.32

PPPPMALFGK

14.05

-1.46

-5.55

PPPPPVPAKL

14.26

-0.21

-4.30

P16892

HDPNDEPEGE

16.60

0.96

-3.13

Q03466

SVPMAPDTFN

16.57

-2.51

-6.60

P53046

TPPTPKSAGH

11.53

-2.05

-6.14

QLSTPPTPKS

13.54

-0.81

-4.90

LSTPPTPKSA

16.45

-1.85

-5.94

P31374

TPDDLPPLKE

12.79

0.07

-4.02

ISPERPSFRQ

13.22

-1.12

-5.21

QPRLPSTASS

13.41

-3.12

-7.21

Q12753

NSPRMPKTGS

12.81

-0.91

-5.00

LPDTSPMSSI

13.32

-1.56

-5.65

SPRMPKTGSR

13.62

-2.82

-6.91

P34250

KPSNPPSSGN

11.40

-2.41

-6.50

LYPKEPPARK

11.97

-1.36

-5.45

YPKEPPARKS

12.87

-0.59

-4.68

P53950

SNPNGAPLRR

14.42

1.84

-2.25

TAPSTAPLGS

14.70

0.56

-3.53

PNGAPLRRYS

15.11

2.65

-1.44

 


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