ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-9.PDB
Scoring matrix: BUD14_1SEM-9_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 16.33
Foldx random average score for Saccharomyces cerevisiae: 11.667

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1305429
Proteins after disorder filtering: 4363
 Total fragments: 56931
Proteins after pattern filtering: 2055
 Total fragments: 10618
Proteins after MINT filtering: 13
 Total fragments: 109


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

16.33

-1.11

0.00

Best peptides

RHYYLLWM

0.00

-5.09

-3.98

         
Interactors      
P13186

RPPIPAAL

7.54

-6.18

-5.07

QNNIPLTP

8.41

-6.93

-5.82

IPLTPLAT

9.20

-6.24

-5.13

P27637

DDYQPLSP

9.54

-3.99

-2.88

Q12276

LPSRKPKR

9.92

-4.97

-3.86

ASPQRPLS

10.29

-5.43

-4.32

DPPQQLPS

10.45

-3.57

-2.46

P38853

KPFDTPTI

11.28

-3.00

-1.89

DLATPVTP

11.42

-4.31

-3.20

P40095

RIPVLPPP

7.17

-6.55

-5.44

NNRIPVLP

8.49

-6.49

-5.38

IPVLPPPR

9.30

-8.29

-7.18

P40036

LPTTPGIR

9.74

-5.63

-4.52

LPPLSPKS

9.84

-5.67

-4.56

SKSLPTTP

10.58

-5.99

-4.88

P42073

KRPPREPI

10.02

-4.17

-3.06

PPREPIEF

10.52

-6.11

-5.00

RPPREPIE

10.60

-3.92

-2.81

P53858

YLPEFEPN

9.36

-5.82

-4.71

FEPNRPVS

9.78

-4.16

-3.05

EPNRPVSM

10.07

-4.65

-3.54

Q03016

KPQTPILP

8.79

-5.90

-4.79

KPSRPSTS

9.15

-5.55

-4.44

PQQLPSRT

9.54

-7.19

-6.08

Q07807

MMFMPPPP

6.68

-8.87

-7.76

PNPIPVKM

7.41

-6.95

-5.84

FMPPPPLS

7.77

-8.23

-7.12

P40187

DEPLNLPN

9.62

-3.72

-2.61

EPLNLPNN

9.88

-6.32

-5.21

GNPSPPIY

10.22

-6.21

-5.10

P39960

FDPTLPAS

8.48

-5.99

-4.88

KFFDPTLP

8.95

-5.15

-4.04

DPTLPASN

9.70

-6.35

-5.24

P26570

DPSTPSKP

10.53

-4.43

-3.32

EPKSPILK

10.65

-5.52

-4.41

PLNSPGLS

10.71

-5.18

-4.07

 


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