ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-8.PDB
Scoring matrix: BUD14_1SEM-8_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.29
Foldx random average score for Saccharomyces cerevisiae: 12.493

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1521324
Proteins after disorder filtering: 4505
 Total fragments: 77593
Proteins after pattern filtering: 2253
 Total fragments: 15246
Proteins after MINT filtering: 14
 Total fragments: 142


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.29

1.95

0.00

Best peptides

DMRWWYRF

0.00

-4.34

-6.29

         
Interactors      
P13186

PIPAALPP

9.02

-4.59

-6.54

SIPMSPNY

9.07

-4.69

-6.64

APSYVPNR

9.39

-3.02

-4.97

P27637

QPLSPPRE

9.08

-3.25

-5.20

YQPLSPPR

9.21

-4.12

-6.07

ESPSTPIV

11.10

-2.82

-4.77

Q12276

TRPKILPK

6.59

-5.16

-7.11

QLPSRKPK

8.91

-3.11

-5.06

DPPQQLPS

9.05

-4.26

-6.21

P38853

PSPAPKDF

9.74

-2.77

-4.72

KPFDTPTI

10.66

-3.16

-5.11

VPTDTPTP

11.60

-2.94

-4.89

P41818

PKTPYQGA

11.09

-0.66

-2.61

P40095

RIPVLPPP

7.75

-6.93

-8.88

NRIPVLPP

9.09

-4.26

-6.21

PNRPTLSD

9.12

-3.33

-5.28

P40036

ELPPLSPK

9.75

-2.22

-4.17

SLPTTPGI

10.16

-3.54

-5.49

LPPLSPKS

10.65

-3.30

-5.25

P42073

RPPREPIE

8.56

-3.92

-5.87

NKRPPREP

10.16

-3.04

-4.99

KRPPREPI

10.35

-2.15

-4.10

P53858

LPEFEPNR

8.99

-3.03

-4.98

DPKPSPPS

9.51

-3.75

-5.70

TPRVKPDS

10.01

-3.36

-5.31

Q03016

ANPKILPK

5.66

-5.42

-7.37

DNIPLLTP

8.30

-3.93

-5.88

DPPQQLPS

9.05

-4.26

-6.21

Q07807

PIPVKMPK

7.54

-3.95

-5.90

PNNSPFPF

8.00

-4.75

-6.70

PFPFAYPN

8.11

-2.52

-4.47

P40187

PSPPIYKK

6.74

-4.50

-6.45

GNPSPPIY

8.39

-3.73

-5.68

EPLNLPNN

10.46

-4.70

-6.65

P39960

NNPATPNQ

9.05

-4.30

-6.25

FFDPTLPA

9.62

-3.86

-5.81

FDPTLPAS

9.87

-3.85

-5.80

P26570

PDPSTPSK

9.39

-4.01

-5.96

PKSPILKT

9.96

-2.40

-4.35

MEPKSPIL

10.18

-3.11

-5.06

 


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