ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-7.PDB
Scoring matrix: BUD14_1SEM-7_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 14.94
Foldx random average score for Saccharomyces cerevisiae: 11.401

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3214721
Proteins after random average filtering: 7179
 Total fragments: 1313299
Proteins after disorder filtering: 4410
 Total fragments: 58538
Proteins after pattern filtering: 2125
 Total fragments: 12105
Proteins after MINT filtering: 13
 Total fragments: 105


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAA

14.94

-1.26

0.00

Best peptides

FRPFFPWR

0.00

-6.94

-5.68

         
Interactors      
P13186

RPPIPAAL

8.56

-3.71

-2.45

IPMSPNYG

9.16

-5.45

-4.19

PEREPPTY

9.32

-5.35

-4.09

P27637

PLSPPREL

8.95

-5.30

-4.04

QPLSPPRE

9.17

-4.51

-3.25

YQPLSPPR

10.30

-4.44

-3.18

Q12276

LPSRKPKR

7.53

-6.22

-4.96

PSRKPKRG

7.56

-4.99

-3.73

QLPSRKPK

8.75

-3.28

-2.02

P38853

PTDTPTPR

9.58

-4.33

-3.07

PFDTPTIQ

9.92

-4.48

-3.22

SAPSPAPK

10.79

-3.05

-1.79

P40095

IPVLPPPR

7.61

-7.98

-6.72

RIPVLPPP

8.82

-6.48

-5.22

PVLPPPRS

8.87

-5.70

-4.44

P40036

ELPPLSPK

8.65

-4.82

-3.56

LPTTPGIR

9.06

-6.13

-4.87

LPPLSPKS

11.20

-4.12

-2.86

P42073

PPREPIEF

8.53

-5.37

-4.11

KRPPREPI

9.68

-3.15

-1.89

RPPREPIE

9.68

-2.50

-1.24

P53858

YLPEFEPN

7.36

-4.94

-3.68

FEPNRPVS

8.13

-5.42

-4.16

LPEFEPNR

8.59

-5.50

-4.24

Q03016

FSPANPKI

8.70

-4.78

-3.52

QLPSRTPK

9.10

-2.80

-1.54

PPQQLPSR

9.29

-6.05

-4.79

Q07807

FMPPPPLS

4.96

-5.11

-3.85

MMFMPPPP

7.45

-8.04

-6.78

PNPIPVKM

8.01

-5.71

-4.45

P40187

NPSPPIYK

7.94

-5.27

-4.01

EPLNLPNN

9.05

-4.95

-3.69

MDEPLNLP

9.67

-5.37

-4.11

P39960

FDPTLPAS

8.70

-6.20

-4.94

NPATPNQK

10.27

-4.34

-3.08

KFFDPTLP

10.68

-4.87

-3.61

P26570

EPKSPILK

8.29

-4.89

-3.63

MEPKSPIL

8.81

-4.26

-3.00

TPSKPNLE

9.53

-3.75

-2.49

 


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