ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-19.PDB
Scoring matrix: BUD14_1SEM-19_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.31
Foldx random average score for Saccharomyces cerevisiae: 17.043

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1584660
Proteins after disorder filtering: 4598
 Total fragments: 78539
Proteins after pattern filtering: 2163
 Total fragments: 9573
Proteins after MINT filtering: 14
 Total fragments: 95


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

17.31

-0.60

0.00

Best peptides

IRIFFGYRF

0.00

-5.12

-4.52

         
Interactors      
P13186

IPMSPNYGN

13.93

-5.72

-5.12

IPLTPLATN

14.42

-3.51

-2.91

PLTPLATNT

15.15

-2.64

-2.04

P27637

DYQPLSPPR

16.33

-3.67

-3.07

DDYQPLSPP

16.53

-2.98

-2.38

PLSPPRELD

16.99

-4.80

-4.20

Q12276

QLPSRKPKR

15.25

-4.18

-3.58

DPPQQLPSR

15.68

-3.67

-3.07

KISTPTSTP

15.78

-0.51

0.09

P38853

NKPFDTPTI

14.36

-2.31

-1.71

PYVPSESSQ

15.48

-2.51

-1.91

PTDTPTPRN

15.56

-3.80

-3.20

P41818

PKTPYQGAV

14.38

-3.85

-3.25

P40095

PRSPNRPTL

12.59

-3.61

-3.01

PDSPSSSSL

14.06

-2.75

-2.15

FPDSPSSSS

14.31

-1.59

-0.99

P40036

LPTTPGIRS

10.68

-3.53

-2.93

PPLSPKSTV

12.91

-4.28

-3.68

ELPPLSPKS

14.11

-4.39

-3.79

P42073

PREPIEFDL

10.73

-4.73

-4.13

NKRPPREPI

14.92

-5.77

-5.17

KRPPREPIE

15.91

-6.71

-6.11

P53858

PNRPVSMSF

12.16

-5.44

-4.84

KPSPPSSKL

12.31

-7.36

-6.76

PRVKPDSQG

13.39

-3.30

-2.70

Q03016

PISSPSNAT

15.01

-1.99

-1.39

KPSRPSTSP

15.14

-2.41

-1.81

DNIPLLTPI

15.17

-4.54

-3.94

Q07807

SPFPFAYPN

13.77

-3.25

-2.65

PFAYPNPMM

14.23

-5.36

-4.76

PVFRPSNNP

14.74

-0.57

0.03

P40187

NPSPPIYKK

13.36

-5.80

-5.20

MDEPLNLPN

14.02

-5.02

-4.42

ENGNPSPPI

15.97

-3.89

-3.29

P39960

PTLPASNSS

15.12

-1.35

-0.75

KFFDPTLPA

15.13

-3.33

-2.73

NPATPNQKM

15.72

-4.27

-3.67

P26570

PLNSPGLSK

11.09

-2.82

-2.22

PKSPILKTN

13.81

-2.14

-1.54

EPKSPILKT

14.60

-2.66

-2.06

 


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