ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-18.PDB
Scoring matrix: BUD14_1SEM-18_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 26.51
Foldx random average score for Saccharomyces cerevisiae: 22.127

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1319507
Proteins after disorder filtering: 4506
 Total fragments: 78404
Proteins after pattern filtering: 2132
 Total fragments: 10696
Proteins after MINT filtering: 13
 Total fragments: 88


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

26.51

3.92

0.00

Best peptides

RFPIWHKRWW

0.00

-1.03

-4.96

         
Interactors      
P13186

QEPLPEREPP

17.48

0.28

-3.64

RPPIPAALPP

17.76

0.67

-3.25

IPMSPNYGNQ

19.05

-0.30

-4.22

P27637

YQPLSPPREL

19.06

-2.28

-6.21

NMSDPASKPN

19.18

0.39

-3.53

Q12276

PQQLPSRKPK

16.68

0.16

-3.76

FGRRPSTTPS

18.09

-1.15

-5.07

RRPSTTPSHV

19.12

0.55

-3.38

P38853

TSNKPFDTPT

19.29

1.19

-2.73

KPFDTPTIQK

20.23

-0.25

-4.17

PFDTPTIQKE

20.43

-1.30

-5.22

P40095

PPPRSPNRPT

16.40

-0.93

-4.85

RSPNRPTLSD

19.05

-1.39

-5.31

SSTFPDSPSS

19.53

-0.72

-4.64

P40036

LPTTPGIRSG

16.80

-0.26

-4.18

KIELPPLSPK

21.88

-0.64

-4.56

LPPLSPKSTV

22.07

-0.68

-4.60

P42073

RPPREPIEFD

17.31

-2.95

-6.88

KRPPREPIEF

18.62

0.75

-3.17

LNKRPPREPI

20.32

-0.34

-4.26

P53858

LPEFEPNRPV

14.78

-3.60

-7.53

FLSTPRVKPD

16.99

-0.69

-4.62

PSPPSSKLYN

19.05

-0.73

-4.65

Q03016

ESDPPQQLPS

16.31

0.71

-3.21

KPSRPSTSPA

16.78

0.65

-3.27

KTNTKPSRPS

17.30

-0.01

-3.93

Q07807

YYPTPNPIPV

13.55

1.53

-2.39

PFAYPNPMMF

14.29

-1.17

-5.09

PSSPPNNSPF

17.14

0.93

-2.99

P40187

PLNLPNNSAH

19.81

-1.82

-5.75

SEENGNPSPP

21.23

4.64

0.71

P39960

NPATPNQKMR

14.41

-1.10

-5.03

IKFFDPTLPA

18.14

-2.00

-5.92

PATPNQKMRD

19.49

-0.45

-4.38

P26570

DPTDSPNEWE

17.81

-2.57

-6.49

MEPKSPILKT

19.15

-1.93

-5.85

AYSTPLNSPG

19.24

1.99

-1.93

 


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