ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-28.PDB
Scoring matrix: BUD14_1GCQ-28_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 17.8
Foldx random average score for Saccharomyces cerevisiae: 14.746

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 2014470
Proteins after disorder filtering: 4418
 Total fragments: 67943
Proteins after pattern filtering: 2172
 Total fragments: 13521
Proteins after MINT filtering: 13
 Total fragments: 137


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

17.80

-0.50

0.00

Best peptides

FRRMLKIPWQ

0.00

-4.04

-3.54

         
Interactors      
P13186

IPAALPPSDM

10.25

-3.79

-3.29

IPMSPNYGNQ

11.09

-4.91

-4.41

PAALPPSDMT

11.47

-5.79

-5.29

P27637

QPLSPPRELD

10.12

-5.57

-5.07

YQPLSPPREL

11.92

-3.89

-3.39

DYQPLSPPRE

12.27

-3.44

-2.94

Q12276

RRPSTTPSHV

10.55

-3.72

-3.22

DPPQQLPSRK

10.95

-3.14

-2.64

ASPQRPLSGQ

12.12

-3.46

-2.96

P38853

NKPFDTPTIQ

9.57

-3.91

-3.41

PFDTPTIQKE

12.31

-6.19

-5.69

KPFDTPTIQK

12.43

-3.54

-3.04

P40095

RIPVLPPPRS

10.22

-4.81

-4.31

PPRSPNRPTL

12.08

-4.67

-4.17

PRSPNRPTLS

12.43

-2.96

-2.46

P40036

LPPLSPKSTV

9.89

-5.45

-4.95

SKSLPTTPGI

10.90

-4.46

-3.96

KIELPPLSPK

11.17

-6.56

-6.06

P42073

KRPPREPIEF

8.64

-4.18

-3.68

PREPIEFDLN

9.69

-4.71

-4.21

RPPREPIEFD

10.05

-4.51

-4.01

P53858

FEPNRPVSMS

11.04

-4.75

-4.25

KPSPPSSKLY

11.15

-6.49

-5.99

LPEFEPNRPV

11.25

-6.46

-5.96

Q03016

SLFSPANPKI

10.98

-5.38

-4.88

NIPLLTPINS

11.27

-4.38

-3.88

DPPQQLPSRT

11.53

-3.06

-2.56

Q07807

MMFMPPPPLS

8.17

-6.84

-6.34

PFAYPNPMMF

9.62

-5.84

-5.34

YPTPNPIPVK

10.02

-4.77

-4.27

P40187

GNPSPPIYKK

11.93

-4.37

-3.87

EPLNLPNNSA

12.01

-4.98

-4.48

PLNLPNNSAH

12.61

-6.53

-6.03

P39960

NPATPNQKMR

11.39

-7.02

-6.52

LINNPATPNQ

11.42

-5.43

-4.93

KFFDPTLPAS

12.88

-3.31

-2.81

P26570

TPSKPNLEVN

11.76

-4.80

-4.30

DPSTPSKPNL

11.92

-5.56

-5.06

MEPKSPILKT

11.93

-5.84

-5.34

 


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