ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-19.PDB
Scoring matrix: BUD14_1GCQ-19_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.03
Foldx random average score for Saccharomyces cerevisiae: 16.074

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1647664
Proteins after disorder filtering: 4586
 Total fragments: 74598
Proteins after pattern filtering: 2121
 Total fragments: 9172
Proteins after MINT filtering: 14
 Total fragments: 86


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

17.03

-1.06

0.00

Best peptides

IRFFIGKSW

0.00

-3.21

-2.15

         
Interactors      
P13186

IPMSPNYGN

12.86

-6.71

-5.65

PMSPNYGNQ

13.02

-3.76

-2.70

SSIPMSPNY

13.86

-3.38

-2.32

P27637

MSDPASKPN

13.85

-5.61

-4.55

PLSPPRELD

14.12

-5.36

-4.30

DYQPLSPPR

15.34

-4.19

-3.13

Q12276

DPPQQLPSR

12.74

-3.22

-2.16

SPQRPLSGQ

14.01

-3.52

-2.46

PQRPLSGQN

14.05

-4.33

-3.27

P38853

MDVPTDTPT

13.79

-3.67

-2.61

PYVPSESSQ

13.84

-1.85

-0.79

PTDTPTPRN

13.93

-3.15

-2.09

P41818

PKTPYQGAV

14.19

-4.59

-3.53

P40095

PDSPSSSSL

12.62

-2.41

-1.35

VLPPPRSPN

12.91

-7.03

-5.97

LPPPRSPNR

13.22

-7.43

-6.37

P40036

LPTTPGIRS

10.45

-3.40

-2.34

IELPPLSPK

12.05

-4.67

-3.61

ELPPLSPKS

14.84

-1.96

-0.90

P42073

PREPIEFDL

12.58

-4.47

-3.41

KRPPREPIE

13.00

-5.20

-4.14

NKRPPREPI

13.63

-6.25

-5.19

P53858

KPSPPSSKL

11.56

-7.26

-6.20

PNRPVSMSF

12.37

-3.59

-2.53

PEFEPNRPV

13.76

-3.80

-2.74

Q03016

DPPQQLPSR

12.74

-3.22

-2.16

DNIPLLTPI

12.90

-4.75

-3.69

HPPISSPSN

13.50

-0.65

0.41

Q07807

NPIPVKMPK

13.46

-3.54

-2.48

NTPVFRPSN

13.55

-1.87

-0.81

SPFPFAYPN

13.80

-3.79

-2.73

P40187

MDEPLNLPN

11.34

-7.34

-6.28

ENGNPSPPI

14.45

-4.92

-3.86

NPSPPIYKK

14.56

-5.16

-4.10

P39960

PATPNQKMR

13.82

-1.83

-0.77

NPATPNQKM

13.85

-2.58

-1.52

INNPATPNQ

14.75

-4.07

-3.01

P26570

DPSTPSKPN

11.94

-3.41

-2.35

PLNSPGLSK

12.06

-1.23

-0.17

VPDPSTPSK

12.57

-1.45

-0.39

 


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