ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-18.PDB
Scoring matrix: BUD14_1GCQ-18_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 28.97
Foldx random average score for Saccharomyces cerevisiae: 22.539

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7178
 Total fragments: 1215820
Proteins after disorder filtering: 4342
 Total fragments: 66549
Proteins after pattern filtering: 2022
 Total fragments: 8644
Proteins after MINT filtering: 13
 Total fragments: 83


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

28.97

3.41

0.00

Best peptides

RRPWWHWQWR

0.00

1.03

-2.38

         
Interactors      
P13186

QEPLPEREPP

19.10

-0.21

-3.62

RNSSIPMSPN

20.20

-0.90

-4.31

SIPMSPNYGN

20.50

-4.31

-7.72

P27637

YQPLSPPREL

19.07

-0.46

-3.87

Q12276

PQQLPSRKPK

18.64

-2.99

-6.40

QLPSRKPKRG

20.82

-0.17

-3.58

RRPSTTPSHV

20.92

2.99

-0.42

P38853

KPFDTPTIQK

19.74

-0.94

-4.35

PFDTPTIQKE

20.62

-2.76

-6.17

ATPVTPTSHQ

21.79

1.93

-1.48

P40095

RSPNRPTLSD

19.90

-3.11

-6.52

PSSTFPDSPS

20.25

-1.46

-4.87

PPPRSPNRPT

20.67

-2.76

-6.17

P40036

KIELPPLSPK

17.96

-3.74

-7.15

LPTTPGIRSG

20.66

-1.60

-5.01

SLPTTPGIRS

21.58

-0.54

-3.95

P42073

LNKRPPREPI

17.70

-4.18

-7.59

KRPPREPIEF

17.91

1.95

-1.46

RPPREPIEFD

21.69

6.52

3.11

P53858

LPEFEPNRPV

18.15

-6.25

-9.66

YLPEFEPNRP

18.52

-1.07

-4.48

FEPNRPVSMS

18.59

-0.11

-3.52

Q03016

KTNTKPSRPS

19.92

-2.12

-5.53

PQQLPSRTPK

20.11

-2.20

-5.61

TSLFSPANPK

20.18

-4.97

-8.38

Q07807

PFAYPNPMMF

14.80

-0.93

-4.34

YYPTPNPIPV

17.93

-0.61

-4.02

PSSPPNNSPF

18.08

-0.64

-4.05

P40187

PLNLPNNSAH

16.81

-5.57

-8.98

GNPSPPIYKK

20.89

-1.80

-5.21

EPLNLPNNSA

21.50

-2.92

-6.33

P39960

NPATPNQKMR

13.35

0.11

-3.30

IKFFDPTLPA

19.94

-4.04

-7.45

NNPATPNQKM

20.77

-1.95

-5.36

P26570

DPTDSPNEWE

16.36

3.48

0.07

TPSKPNLEVN

19.78

-2.13

-5.54

AYSTPLNSPG

21.34

0.00

-3.41

 


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